Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1118 ATGGCCTTGTTTGCTCTTGCAGTGCTGCTTCTTTTAGCCTTCATTAGTTCTTCAAGTGCCACTTGGTGTGTTTGCAAGGATGGAAGTGATGCAGTATTGCAGAAAACCTTGGATTATGCTTGTGGAGCTGGTGCTGATTGTAACCCTTTGCATCAGAATGGCCCTTGTTTCCAACCCAACACTGTGAGAGCTCACTGTAGCTATGCAGTAAACAGTTATTTCCAAAGGAAGGGTCAAGCACAAGGGTCCTGTGACTTTGCAGGAACTGCCACAGTTTCTGCATCAGACCCCAGCAGTGCAGGTTGTTCCTACCCTGCAAGCGCCAGCACTGCCACAACCACCACCACTGGCAGCAGCACCAGTTCCTCTACATACAGTTCCACCACCCCTGGAGTGTTGGGAGGGATTGGCAGTGGCATGGGCCCTTCTGGAGTTGGCAGCACCAGTTCAGATAACAGCCATGGTGGCCTTAGACTTGTTGTTATGGACACTACTTTGGTGCTCATCATCATGCTTTGGTGGGGCTGA 528 0.5057 MALFALAVLLLLAFISSSSATWCVCKDGSDAVLQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCSYAVNSYFQRKGQAQGSCDFAGTATVSASDPSSAGCSYPASASTATTTTTGSSTSSSTYSSTTPGVLGGIGSGMGPSGVGSTSSDNSHGGLRLVVMDTTLVLIIMLWWG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1118 175 Gene3D - 16 128 - -
Aed10g1118 175 PANTHER BETA-1,3 GLUCANASE 1 160 IPR044788 -
Aed10g1118 175 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 160 - -
Aed10g1118 175 Pfam X8 domain 21 91 IPR012946 -
Aed10g1118 175 SMART X8_cls 21 104 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1118 Aed-Chr10 10300050 10306319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1118 18 128 Glycoside Hydrolase AT4G34480 40.179 2.26e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1118 - - gmx:100812033 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1118 10 10300050 10306319 Aed6g1623 6 20144901 20149193 ECH
Aed10g1118 10 10300050 10306319 Aed10g1118 10 10300050 10306319 ECH