Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1461 ATGCCAGGGATTGTTACAGATGGAGTAAATGAAATGAATGGGATTGGGAACACTTCACCACCCTTGAAGGAAACCTCAAGTCCAACTAATAAGAACTTAAAGAGTTCCTTGATTCCACGAAGACGCCTAAGTGTTGGTCCAAATTTTGTTTACACTTCCTCAAATTACCGGCTTCATGAAAATGCTTGTGACATGCAAAGTTCTTCTGCCCAATCACCCTCAAGAAGAAGCTTTGGATCGGTTGGTGATGAGTCTAGAAACAGTTTAGAATTGCATGGTCTAGTTGGAAGGAAGAAAAAAGAGGTTGAGACAGTGAAAAAGGAAGTGAAGACAAAGACAAATAATGTGGATGATATTCGGCCAGCAACTACAAGCAGTGTTGGTTCACCAAAACCAAAGAAAGCATTACAATTGCCACTTGAAACTCAATCAAGATCAATATCAAAGGGAAACGTCTCTTCTCTAAAACCTCCCATTGATAGGAAAAATGATAGCCATTTGAGGAAACAAAATACAGGAATTTCCCGTGTGAAAAAGACTGTTGGTGGAAGATCATTGTCGCACAGTAACATTGATAGTTTCATTGGATCAGCATTGGATAATCCTCAGCTAGGACTAGAATTACTAAACCAAGCAAGGAACATGGTTTCATTAGGAGATAATCCAATGAAGGCTCTTGAACTAGCTCTTCAAGCAAAGAAACTTTTTGAGAGAGCTTCTGCTGCTTATGGGAAACCAAGTTTGGATTTGGCAATGTGTTTACATGTTACAGCAGTAATATACTGCAGTTTGGGACATTTCAACAAAGCAATTCCAATGATAGAGCGCTCAATTGAGATTCCATCTCTTGAGGAAGGCCAGCAACATGCCATTGCAAAATTCGCCGGTCACATGCATCTAGGAGACATCTATGCCATGCTAGGCCATCTTGAGAAATCAATAAAGTGCTACAATGAAGGGTTGAAAGTACAAAGAAAGGCATTGGGAGAGAAAGATCCAAGAGTTGGTGAAACTTGCAGGTATGTGGCTGAAGCAAACTTCCAAGCATTGCAATTTGACGAGGCAGAGAGGATGTGCCAAATCGCCCTTGACATTCATAGAGCAAATAGTTCACCCTCATCTCTCGAAGAAGCAGCTGATAGGAGGCTAATGGGGCTTATATGTGAAGCAGATGGAAAACACGAAGCAGCATTGGAGCATCTTGTTTTGGCAAGCTTGGCAATGGTAGCAAACGGCCAAGTTGTGGAAGTGGCTTCTGTTGACTGCAACATTGGAGACACATACTTATCCCTGGCTAGATACGATGAGGCCAACTTTGCGTATCAGAGAGCATTGACAGTTTACAAGACTCGGAAAGGCGAGAACCATCCTGCTGTGGGATCGGTCTTCGTACGCTTGGCCGAGTTGTATGCCAGGACATGGAAGATAAGAGAATCGAAATCATACTGTGAGAGTGCACTCAGAATCTATGAGAATCCCATGCCTGGTGTCCCTCCAGAGGAAAATGCAAGTGGCTTTATGAATGTCTCAGCCATCTATGAGTCAATAAATGAGCTAGAACAAGCACTTAAGTTGCTTCACAAGGCGCTAGAGATACTCAATGAAGCCTCTGGTCAGAAGAACACAATAGCTGGTATTGAAGCTCAGATGGGGGCCATGTACTACATGTTGGAGAACTACACCGAATCTTACAATGCTTTCAAGAATGCGGTGTCGAAGCTTCGCGCTACCGGGGAGAAGAAATCAGCATTTTTTGGCACTGTTCTTAATCAAATGGGACTTGCTTGTGTGCAACTCAATTCCTTGAGCGAGGCTGCAGTGTTATTTGAAGAAGCCAAAGCCATTTTGGAACAAGTGAATGGACCCTATCACTCTGAAACACTTGGAGTGTATGGCAATCTTGCTGGCACATATGATGCAATTGGAAGGCTGGATGAGGCAATTGAAATATTGGAGAACATAGCGGTAATGAGGGAGGAAAAGCTTGGGACAGGACATCCTGATGTTGCTCACGAGAAGAGAAGGTTGGAGCAGTTGTTAAAGGAAACAGGCAGAGTTCGGACCAGAAAAGCCAAGTCACTCGAGATCCTTTTTGATTTCATTGATGAGGATTGA 2115 0.4303 MPGIVTDGVNEMNGIGNTSPPLKETSSPTNKNLKSSLIPRRRLSVGPNFVYTSSNYRLHENACDMQSSSAQSPSRRSFGSVGDESRNSLELHGLVGRKKKEVETVKKEVKTKTNNVDDIRPATTSSVGSPKPKKALQLPLETQSRSISKGNVSSLKPPIDRKNDSHLRKQNTGISRVKKTVGGRSLSHSNIDSFIGSALDNPQLGLELLNQARNMVSLGDNPMKALELALQAKKLFERASAAYGKPSLDLAMCLHVTAVIYCSLGHFNKAIPMIERSIEIPSLEEGQQHAIAKFAGHMHLGDIYAMLGHLEKSIKCYNEGLKVQRKALGEKDPRVGETCRYVAEANFQALQFDEAERMCQIALDIHRANSSPSSLEEAADRRLMGLICEADGKHEAALEHLVLASLAMVANGQVVEVASVDCNIGDTYLSLARYDEANFAYQRALTVYKTRKGENHPAVGSVFVRLAELYARTWKIRESKSYCESALRIYENPMPGVPPEENASGFMNVSAIYESINELEQALKLLHKALEILNEASGQKNTIAGIEAQMGAMYYMLENYTESYNAFKNAVSKLRATGEKKSAFFGTVLNQMGLACVQLNSLSEAAVLFEEAKAILEQVNGPYHSETLGVYGNLAGTYDAIGRLDEAIEILENIAVMREEKLGTGHPDVAHEKRRLEQLLKETGRVRTRKAKSLEILFDFIDED 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1461 704 MobiDBLite consensus disorder prediction 1 35 - -
Aed6g1461 704 Coils Coil 516 536 - -
Aed6g1461 704 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 700 - -
Aed6g1461 704 MobiDBLite consensus disorder prediction 63 84 - -
Aed6g1461 704 Coils Coil 557 577 - -
Aed6g1461 704 MobiDBLite consensus disorder prediction 90 115 - -
Aed6g1461 704 PANTHER KINESIN LIGHT CHAIN 1 700 - -
Aed6g1461 704 Pfam Tetratricopeptide repeat 417 492 - -
Aed6g1461 704 Pfam Tetratricopeptide repeat 587 652 - -
Aed6g1461 704 Gene3D Tetratricopeptide repeat domain 199 297 IPR011990 GO:0005515
Aed6g1461 704 MobiDBLite consensus disorder prediction 63 166 - -
Aed6g1461 704 Pfam MalT-like TPR region 255 413 IPR041617 -
Aed6g1461 704 MobiDBLite consensus disorder prediction 139 153 - -
Aed6g1461 704 MobiDBLite consensus disorder prediction 11 35 - -
Aed6g1461 704 Gene3D Tetratricopeptide repeat domain 298 405 IPR011990 GO:0005515
Aed6g1461 704 MobiDBLite consensus disorder prediction 116 131 - -
Aed6g1461 704 SMART tpr_5 294 327 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 586 619 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 503 536 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 251 284 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 628 661 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 544 577 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 336 369 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 418 451 IPR019734 GO:0005515
Aed6g1461 704 SMART tpr_5 460 493 IPR019734 GO:0005515
Aed6g1461 704 ProSiteProfiles TPR repeat profile. 418 451 IPR019734 GO:0005515
Aed6g1461 704 SUPERFAMILY TPR-like 547 685 IPR011990 GO:0005515
Aed6g1461 704 Gene3D Tetratricopeptide repeat domain 406 578 IPR011990 GO:0005515
Aed6g1461 704 Gene3D Tetratricopeptide repeat domain 579 693 IPR011990 GO:0005515
Aed6g1461 704 SUPERFAMILY TPR-like 201 370 IPR011990 GO:0005515
Aed6g1461 704 ProSiteProfiles TPR repeat profile. 503 536 IPR019734 GO:0005515
Aed6g1461 704 SUPERFAMILY TPR-like 417 562 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1461 Aed-Chr6 18919856 18923619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1461 - - gmx:100813461 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0949 10 8175055 8179262 Aed6g1461 6 18919856 18923619 ECH
Aed6g1461 6 18919856 18923619 Aed6g1461 6 18919856 18923619 ECH
Aed6g1461 6 18919856 18923619 Aed10g0949 10 8175055 8179262 PCT