Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1457 ATGGAGCGACCAATTCATGATCCGTTGGGGAAACTGCCTTATGTCCCCACCGCCAGCGAGGACGATTCTGTAATTTCTGATTGCGAGAGCGGGGTTTCCGGGGGCGACACGGCGGTGTTGCCTCTCGACGGCGGGTTTGTGGCGGCGGATGATAACACCGACCTCGTCCGGAGCAGATTCGCTCTCGGCCTGGCCGCGCACGGGTTGAAACCCGAGGTGTTGACGGTTCGCAGGAACAACGCGTGTTCCTCCGTCATGGCGCAGGCGCGTGCTCATTCCTTTCATGTTTTCGCGCTTGCCGTCGCTAAATTGCGCGACGGCAATGCCAACGTGAAGTTCGCCTGGTACGCTGCGTCCGGTAAGGAAGAGATTGCCGACATCGTTCAACACGGTTTCGGCCACGCGCATAGCAACGGCTTGCACGGTTTGAGGCACTTGTTGCTGTGCCGCGTTATCTTGGGGAAGACGGAGTTGGTGCCACGTGGCTCCAATCAATGCCGTTCGAGTTCTGAGGAGTTTGATTCTGGGGTGGACGATCTCGCGAATCCCAAGGAGTATGTTATTTGGTGTAACCGGATCAACACTCATGTTTTGCCCGAATATATTTTGAGCTTCAAGCTTCCTTCATTGAAAGGGCATGTGAAGATTGGGGAACCTTTGAGGCCTTCTTCGCCGTGGATGGCATTCCCTGCTTTGATTTCGGTGCTTTCAAAGATTTTGCCTCCGCCTGACATTGCCTTCATTGCCAAGTTTCACAAGGATTATAGAGAAAAGAGGATTTCTCGACATGAGCTGATACAGAAGGTGAGAGTCATAGCAGGCGACAAATTGCTACTATCCGTCATCAAATCTTTCAGAGCCAAGAAAGTACCTACGAGCTTTAAAGCAAACAAGGTGAAAGAATGCCAAGAGGACTGCCAGCAACTAGGACGGAATGATTGTTCATATGAGAGTTCTATTAGCTATTATAGGAAGTGA 978 0.5174 MERPIHDPLGKLPYVPTASEDDSVISDCESGVSGGDTAVLPLDGGFVAADDNTDLVRSRFALGLAAHGLKPEVLTVRRNNACSSVMAQARAHSFHVFALAVAKLRDGNANVKFAWYAASGKEEIADIVQHGFGHAHSNGLHGLRHLLLCRVILGKTELVPRGSNQCRSSSEEFDSGVDDLANPKEYVIWCNRINTHVLPEYILSFKLPSLKGHVKIGEPLRPSSPWMAFPALISVLSKILPPPDIAFIAKFHKDYREKRISRHELIQKVRVIAGDKLLLSVIKSFRAKKVPTSFKANKVKECQEDCQQLGRNDCSYESSISYYRK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1457 325 ProSiteProfiles PARP catalytic domain profile. 1 223 IPR012317 GO:0003950
Aed6g1457 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 17 139 IPR044964 -
Aed6g1457 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 139 295 IPR044964 -
Aed6g1457 325 ProSiteProfiles RST domain profile. 220 291 IPR022003 -
Aed6g1457 325 SUPERFAMILY ADP-ribosylation 107 206 - -
Aed6g1457 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 17 139 - -
Aed6g1457 325 Gene3D - 133 207 - -
Aed6g1457 325 Pfam RCD1-SRO-TAF4 (RST) plant domain 221 286 IPR022003 -
Aed6g1457 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 139 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1457 Aed-Chr6 18884708 18887639 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1457 - - gmx:100784311 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1457 6 18884708 18887639 Aed10g0942 10 8049600 8052165 PCT