Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0942 ATGGAACTAACATTCCCTCAACAAGACGAAGATGTTGTTTCGGTTCTTTCTGATTGCGAGAGCGGCGTTTCGGTGCTGCCAGTGCCACAACAACAGCGTGGGCGTGGCTTTTTCGTTAGCCTTGGGGAAGGTGACGTGGTTCACGATCTTATCAAGAAACGCTTTCTTCGTGGACTGGGCCTGCTCGGGCCCATAACCGATGTCGTCTCCGTTCACCGAAACGCGTGTTCCGACGTCGTTTCGCAGGCGCGCCTTTACTCGTTTCAGATTCACGCTAAGGCGGTGGCGACTCTCCGCGCCGGGAATCCCAACGTCAGGTACGCCTGGTATGCCACCCGCGGCCAGGACGACGTAAACGACATCGTTTCGCGCGGCTTCGGTTTCCAACACGGTCAGAGACTCGTTCTCTCCCCCGACGAGAATCCTCTCCAAAGTGTGGAAGAGTGTGCGGTTGGGGAAGACGGTGTGAGGCACGCGTTACTGTGCCGCGTGATTCTAGGGAGATCAGAGCTTGTTCGTGATGATGATAACACTACAGAACAGTGCTATCCGAGTTGTGAAGAGTATGATTCTGGAGTGGATAGTTTTTCGAGTCCTGGCAAGTACATCATTTGGAGTAATCGCATGAACACTCATGTTTTGCCTGCGTACGCTGTAAGCTTCAGAGTTTCATCCTTCAAGGGGAATGAGAAGAGTGAAGAAGAAGAAGAACCTTGGAGACCTACTTCCCCTTGGATGCCATTCCCAACTCTGATTTCTGTGCTTTCCAAGGTTTTGGCTCCATGTGATATTGCCCGCATCTCCAAATTCTATAAAGATAAAAAAGAGAAGAAGATTTCACGACATGATTTGATTCAAAGGGTGAGACGAATAGCTGGAGACAAGTTGCTGCTTGCAGCCATCAAATCTTATAGAGACAACAAGATAATCGTTCTTGGTGCTTCTGGATTATATATTGTGGAAATTCCGGAAGTGGAATTAGTTTCTGTGTGCAACATAGATCTCATAACTATAAAAGAAACCAAGCTTTCTACAATCAAAGGTCAAAAGAATGGCTTAGCAACGCGGATAGAGAATGATTTCCTTCACATGATCATAAAAGAAGGGGTTGACTTGACACACAATACTAATTCTTCATAA 1140 0.4746 MELTFPQQDEDVVSVLSDCESGVSVLPVPQQQRGRGFFVSLGEGDVVHDLIKKRFLRGLGLLGPITDVVSVHRNACSDVVSQARLYSFQIHAKAVATLRAGNPNVRYAWYATRGQDDVNDIVSRGFGFQHGQRLVLSPDENPLQSVEECAVGEDGVRHALLCRVILGRSELVRDDDNTTEQCYPSCEEYDSGVDSFSSPGKYIIWSNRMNTHVLPAYAVSFRVSSFKGNEKSEEEEEPWRPTSPWMPFPTLISVLSKVLAPCDIARISKFYKDKKEKKISRHDLIQRVRRIAGDKLLLAAIKSYRDNKIIVLGASGLYIVEIPEVELVSVCNIDLITIKETKLSTIKGQKNGLATRIENDFLHMIIKEGVDLTHNTNSS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0942 379 ProSiteProfiles PARP catalytic domain profile. 26 235 IPR012317 GO:0003950
Aed10g0942 379 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 4 314 - -
Aed10g0942 379 Pfam RCD1-SRO-TAF4 (RST) plant domain 240 305 IPR022003 -
Aed10g0942 379 Gene3D - 38 223 - -
Aed10g0942 379 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 4 314 IPR044964 -
Aed10g0942 379 ProSiteProfiles RST domain profile. 239 310 IPR022003 -
Aed10g0942 379 SUPERFAMILY ADP-ribosylation 100 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0942 Aed-Chr10 8049600 8052165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0942 - - gmx:100791977 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1457 6 18884708 18887639 Aed10g0942 10 8049600 8052165 PCT