Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1429 ATGAGAAAAGTGAAAGTTGAAAGGAAGAAAAGAACCCTTGCAACACTACGGTACTTAGCAGGCCTTGCTGGGCCTAGTGGTTTCGGCTCTAACTCCACAGCTGAACAAGTCACTCAAGAACATTGCTCCTCCTTGTTCCCATCATATCTAACCGCTCTCATAACTGGTGCGACTTCTGGTATTGGAGCTGAAACAGCTAGAGTATTAGCAAAGAGAGGAGTGAGGGTTGTGATTAGTGCTAGGGACTTGAGAAAGGGCAAGGAAGTGAGAGAGAAAATCCTAAAGGAGAGTCCTCATGCTGAGGTTTTTCTGTTGGAGATTGATCTTAGCTCTTTTGCTTCTGTACAGAGATTTTGTTCTGAGTTTTTAGCTTTGGAACTGCCCCTTAATATTCTCATTTACAATGGCACACGCGCATATGCTCAGTCAAAATTAGCCACAATTCTGCATGTGAAGGAAGTGGCCAAACAGCTCAAGGAAAGGAATGCGAATGTAACTATTAACGCAGTGCATCCAGGAATTGTGAAGACGGGAATTATTAGAGCACATAAGGGCTTAATAACGGATTCCCTGTTTTTCATTGCATCGAAGTTGCTGAAATCGATATCACAGGGTGCATCAACGACGTGTTATGTTGCTCTAAGCGGAAAAACAGAAGGAGTGAGTGGGAAATATTTTACAGATTGTAACGAGAGTAACTGCTCGAGTCTAGCAAATGACGAATCAGAAGCTATAAAGCTATGGAACGACACCAATGCCTTGCTTCACAAACGGCTACGTCAAGCAGCAAAGTGA 795 0.4327 MRKVKVERKKRTLATLRYLAGLAGPSGFGSNSTAEQVTQEHCSSLFPSYLTALITGATSGIGAETARVLAKRGVRVVISARDLRKGKEVREKILKESPHAEVFLLEIDLSSFASVQRFCSEFLALELPLNILIYNGTRAYAQSKLATILHVKEVAKQLKERNANVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSISQGASTTCYVALSGKTEGVSGKYFTDCNESNCSSLANDESEAIKLWNDTNALLHKRLRQAAK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1429 264 PANTHER RETINOL DEHYDROGENASE 15 135 - -
Aed6g1429 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 51 228 IPR036291 -
Aed6g1429 264 Pfam short chain dehydrogenase 51 136 IPR002347 -
Aed6g1429 264 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 134 260 - -
Aed6g1429 264 Gene3D - 134 260 - -
Aed6g1429 264 Gene3D - 51 133 - -
Aed6g1429 264 PRINTS Glucose/ribitol dehydrogenase family signature 163 180 IPR002347 -
Aed6g1429 264 PRINTS Glucose/ribitol dehydrogenase family signature 140 159 IPR002347 -
Aed6g1429 264 PRINTS Glucose/ribitol dehydrogenase family signature 51 68 IPR002347 -
Aed6g1429 264 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 15 135 - -
Aed6g1429 264 PANTHER RETINOL DEHYDROGENASE 134 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1429 Aed-Chr6 18696531 18699886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1429 52 111 Lipid Metabolism Gene Families AT1G24470 38.333 1.87e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1429 - - gmx:100776567 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1429 6 18696531 18699886 Aed6g1429 6 18696531 18699886 ECH
Aed6g1429 6 18696531 18699886 Aed10g0910 10 7669194 7673178 PCT