Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0910 ATGAAGGCAACACTGAGATACTTAGCAGGAGTGGCAGGCCCTAGTGGTTTTGGCTCAAATTCAACAGCTGAACAAGTCACTCAACATTGTTCTTCCTTCCTTCCTTCTTCTCTAACAGCTCTCATCACTGGGGCAAGTTCTGGTATTGGAGCTGAAACAGCAAGAGTGTTAGCAAAGAGAGGAGTGAGAGTTGTGATCGCAGCAAGGAACTTGAAGAAAGCCAGGGAAGTGAAAAAGAACATACAAAAGGAGACTCCAAAAGCTGAGGTTGTTCTGTTGGAGATTGATCTTGGCTCTTTTGCTTCTGTCCAGAGATTTTGTTCCGAGTTTTTAGCTTTAGAACTTCCCCTTAATATTCTCATATACAATGGCACACGTGCTTATGCTCAGTCAAAATTGGCAAATATTTTGCATGCAAAGGAAATAGCCAAGCAACTCAAGGTGGTTGGAATGAGAAATCATAATAACTCGAAACTTTATAGTACTGCAAGGAATGCAAGAGTAACTATCAATGCAGTGCATCCAGGCATTGTTAAGACAGGAATTATTAGAGCTCATAAGGGCTTAATAACGGATTCCCTATTTTTTATTGCATCAAAGCTACTCAAAACGACATCACAGGGTGCATCAACTACGTGTTATGTTGCACTGAGCCCCAAAACAGAAGGGGTAAGTGGAAAATACTTTGCAGATTGCAATGAGAGTAAATGCTCGAGCCTAGCAAATGACGAATCAGAAGCTCAAAAGCTATGTAACAACACACATGCCTTGCTTCACAAACGACTGCGTCAAGCAACAATTTGA 804 0.4142 MKATLRYLAGVAGPSGFGSNSTAEQVTQHCSSFLPSSLTALITGASSGIGAETARVLAKRGVRVVIAARNLKKAREVKKNIQKETPKAEVVLLEIDLGSFASVQRFCSEFLALELPLNILIYNGTRAYAQSKLANILHAKEIAKQLKVVGMRNHNNSKLYSTARNARVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKTTSQGASTTCYVALSPKTEGVSGKYFADCNESKCSSLANDESEAQKLCNNTHALLHKRLRQATI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0910 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 232 IPR036291 -
Aed10g0910 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 122 263 - -
Aed10g0910 267 Gene3D - 124 263 - -
Aed10g0910 267 Coils Coil 64 84 - -
Aed10g0910 267 Pfam short chain dehydrogenase 39 132 IPR002347 -
Aed10g0910 267 Gene3D - 39 123 - -
Aed10g0910 267 PANTHER RETINOL DEHYDROGENASE 4 123 - -
Aed10g0910 267 PRINTS Glucose/ribitol dehydrogenase family signature 166 183 IPR002347 -
Aed10g0910 267 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Aed10g0910 267 PANTHER RETINOL DEHYDROGENASE 122 263 - -
Aed10g0910 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0910 Aed-Chr10 7669194 7673178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0910 40 99 Lipid Metabolism Gene Families AT1G24470 36.667 6.87e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0910 - - oeu:111400646 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0910 10 7669194 7673178 Aed10g0910 10 7669194 7673178 ECH
Aed6g1429 6 18696531 18699886 Aed10g0910 10 7669194 7673178 PCT