Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1427 ATGGCGCCAAGCCTAACCGCCCTGCAAGAGAAAGCGCTTCTGAACGCTAATCCACACTTATCCATAAAACTCGAATCCTCAACTTTCCTCGCAAACGGCCACCCAATCCTCACTGAAGTCCCACCGAACATAACAACAACAAGCACCACCCACGACGCTTCCACCAACCCCTCCGTCGGCTGCTTCGTCGGTTTCTCCGCCGACGAGGCACGCAGCCGGCACGTGATCTCCCTGGGCAAACTGAGAGGCATCAGGTTCACTAGCATATTCCGGTTCAAGCTCTGGTGGAGCACCCACTGGTCCGGAAGCAACGGCCGCGACGTCGAGAACGAAACCCAAATAATAATCCTCGAAAACGACACTGTCAAGGGCCGACCCTACGTCCTCATTTTACCCCTCCTCGAAGGACCCTTCCGAGCCTCTCTCCAACCCGGCCACGAGGACCACGTGGACGTCTGCATGGAGAGCGGCTCCGCACGTGTCACCGAGTCACGCTTCCAAACCTCCCTCTACATGCACGTGCACCACGACCCTTTCAGTCTCGTCGACGAGGCGCTGAGAGTGATCAGAGTCCATCTCGGAACGTTCAGGCTCATGGAGGAGAAAACCCCGCCGGGGATCATCGACAAGTTCGGGTGGTGCACGTGGGACGCGTTTTACCTCGACGTGCATCCCGAGGGGGTGCGCGAAGGAGTGAAGGGCCTCGTGGAGGCTGGCTGCCCTCCCGGTTTGGTCATCATCGACGACGGCTGGCAGACGTTTTGCCGTGACGATGAATCCGTCACCGACGGGGGAAGCTTGAACTGCTCCGTGCCCGGGGAGCAGATGCTGAACAGGTTAACGAGTTTCGAAGAGAATTGTAAGTTTAAGGAGTACCGGTCGAGGATGGATACAGGTATGGGTGCGTTTGTGAGGGATTTGAAGGAGGAGTTTGGTGAGTTGGAGTATGTGTATGTGTGGCATGCTTTTTGTGGCTACTGGGGTGGGGTTAGGCCTAACGTACCGGGGATGCCGGAGGCTACGGTGGTTCCGACGAAGTTGTCTCCCGGAGCGGAGATGACTATGACGGATCTGGCGGTGGTGAAGATCATGGAGATTGGGGTGGGGCTGGTGCCACCGCATGAGTTGTACGAGGGACTTCATTCTCATCTGGAATCTGTGGGAATTGATGGTGTCAAGATTGATGTCACGCATGTTCTAGAAATGGTATCGGAGGAATATGGAGGTCGTGTTGAAGTGGCGAAAGCATATTACAGAGCACTGACTGCCTCCGTGAGGAAGCATTTCAAAGGCAATGGTGTCATTTCAAGCATGCAGCAGTGCAATGATTTCATGTTCCTTGGTACGGAAACCATTTCACTTGGACGAGTCGGTGATGATTTTTGGTGTACGGACCCAGCTGGTGATCCAAACGGTGCCTATTGGCTGCAAGGATGTCACATGGTGCACTGTGCTTACAACAGCTTGTGGATGGGAAATTTCATACACCCTGATTGGGACATGTTCCAATCTCATCATCCTTGTGCCGAATTCCACGCTGCTTCAAGAGCCATCTCTGGTGGACCAATTTATATTAGCGACTCTGTTGGAAAACACAACTTCAAACTGCTTAAGAACCTCAATGCCTCTGAGTTTTCACACTCTGTGACTTGCTTTGCAAGTCCTCAAGACATTGAATGGGGCAAAGGGAAGAACCCAATTTGCATCAAAGGGGTGGATGTATTTGCTGTGTACATGTTTAAAGATGAGAACTTGAAGCTGCTCAAGTACACAGAGAGTGTAAAAGTTTCACTTGAGCCTTTTAGCTTTGAGCTTTTCACAGTTTCCCCAGTGGTGAACTTACCCAGAAAATCAATCCAATTTGCTCCAATTGGATTGGTGAACATGCTCAACTCTGGGGGCTCTATTCTGTCAATAGAATTTGATAAACAGGAAGATTTGGCGACAATTGGGGTGAGAGGACACGGCGAAATGAGGGTATTTGCATCAGAGAAGCCAGAGTGTGTTAAGATTGATGGAAAATCTGTGGAATTTGATTATGTTGATAGCACCGTGAGGCTCCAAGTGTTGTGGCCTAGTTCTTCAAGGTTGTCCGTGGTTGAGTATTTGTTCTGA 2115 0.5139 MAPSLTALQEKALLNANPHLSIKLESSTFLANGHPILTEVPPNITTTSTTHDASTNPSVGCFVGFSADEARSRHVISLGKLRGIRFTSIFRFKLWWSTHWSGSNGRDVENETQIIILENDTVKGRPYVLILPLLEGPFRASLQPGHEDHVDVCMESGSARVTESRFQTSLYMHVHHDPFSLVDEALRVIRVHLGTFRLMEEKTPPGIIDKFGWCTWDAFYLDVHPEGVREGVKGLVEAGCPPGLVIIDDGWQTFCRDDESVTDGGSLNCSVPGEQMLNRLTSFEENCKFKEYRSRMDTGMGAFVRDLKEEFGELEYVYVWHAFCGYWGGVRPNVPGMPEATVVPTKLSPGAEMTMTDLAVVKIMEIGVGLVPPHELYEGLHSHLESVGIDGVKIDVTHVLEMVSEEYGGRVEVAKAYYRALTASVRKHFKGNGVISSMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGAYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSHHPCAEFHAASRAISGGPIYISDSVGKHNFKLLKNLNASEFSHSVTCFASPQDIEWGKGKNPICIKGVDVFAVYMFKDENLKLLKYTESVKVSLEPFSFELFTVSPVVNLPRKSIQFAPIGLVNMLNSGGSILSIEFDKQEDLATIGVRGHGEMRVFASEKPECVKIDGKSVEFDYVDSTVRLQVLWPSSSRLSVVEYLF 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1427 704 Pfam Raffinose synthase or seed imbibition protein Sip1 25 541 IPR008811 -
Aed6g1427 704 Pfam Raffinose synthase or seed imbibition protein Sip1 544 686 IPR008811 -
Aed6g1427 704 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 539 704 - -
Aed6g1427 704 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 1 540 - -
Aed6g1427 704 PANTHER - 539 704 IPR008811 -
Aed6g1427 704 PANTHER - 1 540 IPR008811 -
Aed6g1427 704 Gene3D Aldolase class I 209 545 IPR013785 -
Aed6g1427 704 SUPERFAMILY (Trans)glycosidases 206 539 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1427 Aed-Chr6 18675802 18685122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1427 538 704 Glycoside Hydrolase AT5G40390 44.910 7.13e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1427 K06617 - gmx:100798883 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0907 10 7636479 7642006 Aed6g1427 6 18675802 18685122 ECH
Aed6g1427 6 18675802 18685122 Aed6g1427 6 18675802 18685122 ECH