Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0907 ATGGCGCCCCCAAGCCTAACCAAAACTTCGGAACTACAAGCATTGAGTCTTGTGAATTGCACTTTACCTCACTCCATAACCTTAGAAGGATCAAATTTCCTCGCCAACGGCCACCCTTTTCTAACCGAAATCCCCGACAACATAGTAGCCACCCCCTCGCCCGTCGTCGCGGGTGGTTGCTTCGTGGGGTTCGACGCTGACGACGAGCCCAGAAGCCGACACGTGGCGCCGCTGGGGAAGCTGAGGGGGATAAAATTCATGAGCATATTCCGGTTCAAGGTGTGGTGGACCACTCACTGGGTCGGTAGCAACGGACACCAACTTGAGCACGAAACTCAGATGCTCTTACTCGACAAAAACGACTCGCTGGGACGCCCCTACGTCTTCATTCTCCCGATCCTCGATGGATCCTTCCGAGCCTCCCTCCAACCCGGTTTCGATGACTACGTCGACGTTTGCGTCGAGAGCGGCTCGACACGTGTCAGAGGCTCCAGCTTCAGGAGCTGCTTGTACATCCACGTCGGAGATGACCCGTACCGGTTAGTGAAAGAAGCAACCAAAGTCGTTAGGATGCACTTGGGGACTTTCAAACTTCTCGAGGACAAAACCCCGCCAGTGATTATAGACAAGTTTGGTTGGTGTACATGGGACGCGTTTTACCTGAAGGTGCATCCCACAGGGGTGTGGGAAGGAGTGAAGGGGCTTGTGGAGGGAGGGTGCCCTCCGGGGATGGTCCTAATCGACGACGGCTGGCAATCCATTTGTCACGACGAGGAAGACCCCATCACGGGCCAAGAGGGTGTCAAGCGAACCTCCGCAGGGGACCAAATGCCCTGCAGGCTCGTCAAGTTCCACGAAAATTACAAGTTCCGAGACTATTGCAGTGACACAGAGAAGAAGGGTATGGGTGGCTTTGTTAGGGACTTGAAGGAAAAGTTTAAGAGCGTGGAGCAGGTGTATGTTTGGCACGCGCTCTGTGGCTACTGGGGTGGGGTCAGACCTAAGGCTCCGGGAATGCCCGAGGCTAAGGTTGTTACTCCGAAGCTGTCGAAGGGGCTGAAAATGACTATGGAGGATTTAGCGGTGGATAAGATTGTGAGTAATGGAGTGGGGCTGGTGCCACCTCACCTGGCGCACCGCTTGTACGAGGGGCTCCACTCGCGTTTGGAATCGGCGGGTATTGACGGCGTCAAGGTTGACGTTATACACTTGCTAGAGATGCTATCCGAGGAATATGGTGGCCGTGTTGAACTAGCCAAAGCTTATTACAAAGCACTCACTGCTTCTGTGAAGAAGCATTTCAAAGGCAATGGAGTCATTGCCAGCATGGAGCATTGTAATGACTTCTTTCTCCTTGGCACCGAAGCGATAGCCCTTGGTCGCGTAGGAGATGATTTTTGGTGCACTGATCCGTGTGGCGATCCAAATGGGACGTATTGGCTCCAAGGGTGTCACATGGTGCACTGTGCCTACAACAGCTTATGGATGGGAAATTTCATTCACCCAGATTGGGACATGTTCCAATCCACTCACCCTTGTGCCGAGTTCCATGCTGCCTCTAGAGCCATCTCTGGTGGACCCATTTACGTTAGCGATTGTGTTGGAAAGCACAACTTCAAGTTGCTCAAGAGCCTCACTTTATCCGATGGCACCATTTTGCGTTGCCAACACTATGCACTCCCCACAAGAGACTCTTTGTTTGAAGATCCCTTACATGATGGTAAGACCATGCTCAAAATTTGGAATCTCAACAAATATACAGGTGTTTTGGGTCTATTTAATTGCCAAGGAGGAGGGTGGTGTCCTGTGACTCGACGAAACAAGAGTGCCTCTGAGTTTTCACAAACTGTGACATGCTTAGCAAGTCCTCAAGATATCGAATGGAGCAATGGAAAGAGCCCAATATGCACAAAAGGTGTGGATGTGTTTGCTGTATATTTCTTCAAGGACAAGAAACTAAAGCTCATGAAAAAGTCGTCAAAGAAATTGGAAGTTTCACTTGAGCCATTTAGTTTTGAGCTATTGATAGTGTCTCCAGTGACTGTGTTACCAAAGAGGTTAATTCAATTTGCTCCAATTGGATTAGTGAACATGCTTAACTCTGGTGGTGCCATTCAGTCCATGGAGTTTGACAACAACCACACAGACATGGTGAAAATTGGGGTTAGGGGCTGTGGGGAGATGAGGGTGTTTGCATCAGAGAAACCAGCTAGTTGCAAAATAGATGGGATAGCTGTGGAATTTGACTATGAGGATAAAATGGTGAGAGTGCAAGTTCCCTGGCCTAGTTCTTCAAAATTGTCAATGCTTGAGTTTTTATTTTGA 2325 0.4981 MAPPSLTKTSELQALSLVNCTLPHSITLEGSNFLANGHPFLTEIPDNIVATPSPVVAGGCFVGFDADDEPRSRHVAPLGKLRGIKFMSIFRFKVWWTTHWVGSNGHQLEHETQMLLLDKNDSLGRPYVFILPILDGSFRASLQPGFDDYVDVCVESGSTRVRGSSFRSCLYIHVGDDPYRLVKEATKVVRMHLGTFKLLEDKTPPVIIDKFGWCTWDAFYLKVHPTGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDEEDPITGQEGVKRTSAGDQMPCRLVKFHENYKFRDYCSDTEKKGMGGFVRDLKEKFKSVEQVYVWHALCGYWGGVRPKAPGMPEAKVVTPKLSKGLKMTMEDLAVDKIVSNGVGLVPPHLAHRLYEGLHSRLESAGIDGVKVDVIHLLEMLSEEYGGRVELAKAYYKALTASVKKHFKGNGVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPCGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFKLLKSLTLSDGTILRCQHYALPTRDSLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSASEFSQTVTCLASPQDIEWSNGKSPICTKGVDVFAVYFFKDKKLKLMKKSSKKLEVSLEPFSFELLIVSPVTVLPKRLIQFAPIGLVNMLNSGGAIQSMEFDNNHTDMVKIGVRGCGEMRVFASEKPASCKIDGIAVEFDYEDKMVRVQVPWPSSSKLSMLEFLF 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0907 774 Pfam Raffinose synthase or seed imbibition protein Sip1 29 757 IPR008811 -
Aed10g0907 774 Gene3D Aldolase class I 202 548 IPR013785 -
Aed10g0907 774 PANTHER - 4 774 IPR008811 -
Aed10g0907 774 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 4 774 - -
Aed10g0907 774 SUPERFAMILY (Trans)glycosidases 205 556 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0907 Aed-Chr10 7636479 7642006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0907 1 774 Glycoside Hydrolase AT5G40390 63.430 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0907 K06617 - gmx:100800308 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0907 10 7636479 7642006 Aed6g1427 6 18675802 18685122 ECH
Aed10g0907 10 7636479 7642006 Aed10g0907 10 7636479 7642006 ECH