Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1399 ATGGGTTCTGCTAACAGACTAATTACTACAAATGGGAAACAACCTCTCTTCTCTTTTGGATTGATATCCGATGTGCAATATGCTGACATCCCTGATGGTAGGTCATTCCTTGGTGTTCCACGTTACTATAGGCATAGCATTCTTGTGTTACAAAGAGCAGTGAAAGAATGGAATAGTAGTAAGAGGCACAAGTTTGTGATCAATTTTGGAGACATTGTTGATGGATATTGTCCAAAAGATCAATCTCATAATACTGTAAAGAAAATTGCGGATGAATTTGAGATGTTCAAAGGACCAGTCTATCATTTGATTGGCAATCACTGCCTATACAATCTGCCTCGAAGTAAGTTGATTCCACTATTGAAGATCAAGAGTTTCGAAAGCCGTGCTTACTATGATTTTTCACCGGTTTCTGAATACAGATTTGTGGTTCTTGATGGCTATGACATAAGTGCAATTGGCTGGCCTCAAGACCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAGAAGAATCCTAATGAAGACAAGAACAATCCAACAAGTTTGGTGGGCCTTGAAAGAAGGTTTCTTATGTTCAATGGGGCTATTGGAAAGGAACAAATGGAATGGTTGAATAGTGTTCTTCATGAAGCAACAAAATTGAAACAGAAGGTAGTGGTGTGTTGCCATCTCCCTCTAGATCCTGGTGCATCATCCAAGGAGGCATTGTTATGGAACTATGATGAAGTGATGAGTTTGATACACAGATACACTTGTGTGAAGCTGTGTCTATCTGGACATGATCACAAAGGTGGATACTCCATTGATTCCCATGGAATTCACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTTCTGGCACGGATGCGTTTGGATATGTTGATGTTTATGATGATAGAATATCACTTTATGGCACTGACAGAATGCAGAGTACAAACATGTATTTTCATCCTAAAGCAGATTTGTGA 975 0.399 MGSANRLITTNGKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNSSKRHKFVINFGDIVDGYCPKDQSHNTVKKIADEFEMFKGPVYHLIGNHCLYNLPRSKLIPLLKIKSFESRAYYDFSPVSEYRFVVLDGYDISAIGWPQDHPKTLEALKFLREKNPNEDKNNPTSLVGLERRFLMFNGAIGKEQMEWLNSVLHEATKLKQKVVVCCHLPLDPGASSKEALLWNYDEVMSLIHRYTCVKLCLSGHDHKGGYSIDSHGIHHRVLEAALECPSGTDAFGYVDVYDDRISLYGTDRMQSTNMYFHPKADL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1399 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Aed6g1399 324 PANTHER - 3 321 - -
Aed6g1399 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Aed6g1399 324 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 3 321 - -
Aed6g1399 324 SUPERFAMILY Metallo-dependent phosphatases 15 312 IPR029052 -
Aed6g1399 324 Gene3D - 12 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1399 Aed-Chr6 18513845 18514819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1399 K01517 - gmx:100808714 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1399 6 18513845 18514819 Aed6g1399 6 18513845 18514819 ECH
Aed6g1399 6 18513845 18514819 Aed10g0877 10 7345546 7346511 PCT
Aed10g0878 10 7347260 7350323 Aed6g1399 6 18513845 18514819 PCT