Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0878 ATGGAGGGAGGGAGTACTTTCTTCTTAACCTTGACGCTAATTCCATTCTATTGCTGCATCTCTGCTTTCAACAAACGTCCACTACGACAACGAACACCTTTCGCCGTTTCAAATTACTACTTAACACCGGAGCACATAGAGAGAGACATCATGGTTTCTCCTAATGGACTAGCTACCACTCAGCCACTTTTTTCTTTTGGATTGATTGCTGATGTCCAATATGCTGATATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGGTTTTATAGACACAGTCTTCTCATATTGCAGAGAGCAGTTAAAGAATGGAATACACATCAGAAGCACAAGTTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAGGGAACAATCTCTTGATACTGTAAAGAAACTTGTGGATGAATTTGATATGTTCGCGGGAGGACCTGTGTATCATATGATTGGCAATCACTGCCTATACAATCTTCCTCGCAGCAAGTTACTTCCATTATTGAAGATCCAAAATCTCGATGGCCATGCATACTATGATTTCTCACCAGTGCCTGAATATAGATTTGTAGTTCTGGATGCCTATGACATCAGTGCCATTGGTTGGCCTCAAGATCATCCAAAAACATTGGAGGCCATGAAAATCCTAAGGGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAATTTGGAGGGACCCAAAAGAAGGTTTGTAATGTTTAATGGAGCCGTTGGAAAGGAACAGATGGAATGGTTAGATGTTGTTCTCTTGGAGGCAACAAACTTGAAACAGAAGGTGGTTGTTTGCTGCCATCTGCCTCTAGATCCTGGTGCGGCCACTGAAGAGACACTGTTGTGGAATTATGATGGAGTGATGAATTTGATATACAAATACAATTGCGTTAAGGTATGTCTTGCAGGGCATGATCATACAGGCGGATACTCTGTTGATTCTCATGGGATACACCATAGAGTTTTTGAAGCTGCTTTGGAATGTCCTCCTGGTACAGATGCATTTGGATACATTGATGTCTATGATGACAGGATATCACTTGTTGGAACTGACAAAATGAAAAGTACAGACATGCGTTTTAGTTAA 1104 0.4103 MEGGSTFFLTLTLIPFYCCISAFNKRPLRQRTPFAVSNYYLTPEHIERDIMVSPNGLATTQPLFSFGLIADVQYADIPDGRSFLGVPRFYRHSLLILQRAVKEWNTHQKHKFVINFGDIVDGFCPREQSLDTVKKLVDEFDMFAGGPVYHMIGNHCLYNLPRSKLLPLLKIQNLDGHAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEAMKILREKNPNEDKNSPTNLEGPKRRFVMFNGAVGKEQMEWLDVVLLEATNLKQKVVVCCHLPLDPGAATEETLLWNYDGVMNLIYKYNCVKVCLAGHDHTGGYSVDSHGIHHRVFEAALECPPGTDAFGYIDVYDDRISLVGTDKMKSTDMRFS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0878 367 CDD MPP_Nbla03831 64 353 IPR041869 -
Aed10g0878 367 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 51 366 - -
Aed10g0878 367 PANTHER - 51 366 - -
Aed10g0878 367 SUPERFAMILY Metallo-dependent phosphatases 62 361 IPR029052 -
Aed10g0878 367 Pfam Calcineurin-like phosphoesterase 65 313 IPR004843 GO:0016787
Aed10g0878 367 Gene3D - 59 359 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0878 Aed-Chr10 7347260 7350323 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0878 K01517 - gmx:100792911 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0878 10 7347260 7350323 Aed10g0878 10 7347260 7350323 ECH
Aed10g0878 10 7347260 7350323 Aed6g1399 6 18513845 18514819 PCT