Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1386 ATGGAGCAATTCTGGTCTGGGAGTGCCATCAATGAGAACAAAGGAATGGTAGATAATTTGCAGCGTTATGGAGTAATCTCATCTAGAAAGGTAGGTGAAGTAATGGAAACCATTGACAGAGCTCTGTTTCTACCTAGTGGCACTGGCGGTGGCGCCGGACTCCAACCTTATGTCGACAGTCCTATGCCAATTGGCTACAATGCCACCATCTCTGCACCACATATGCATGCCTCCTGCCTTCAGTTGCTCGAGAAGAATTTGCAACCTGGAATGCGCGTTCTTGACGTTGGCTCCGGAACGGGATACCTGACTGCATGCTTTGCCTTGATGGTTGGACCTGAAGGCCGTGCTATTGGTGTGGAACATATTCCCGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGTTGCAGATCAACCATTGAAAGAAGGTTCCCTTTCTGTGCATGTGGGTGATGGAAGGCAAGGTTGGCCCGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCGGCACCCGAAATCCCACAACCACTTATCGACCAGTTGAAGCTGGGTGGCAGAATGGTTATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTTGTGGATAAGAACTCTGATGGTTCTATCAGTATCCGGACTGAGACTTCTGTTCGATATGTGCCTCTCACTAGCAAAGAAGCTCAACTGCGAGGTTGGTGA 711 0.4684 MEQFWSGSAINENKGMVDNLQRYGVISSRKVGEVMETIDRALFLPSGTGGGAGLQPYVDSPMPIGYNATISAPHMHASCLQLLEKNLQPGMRVLDVGSGTGYLTACFALMVGPEGRAIGVEHIPELVSFSIENIKKSVADQPLKEGSLSVHVGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKLGGRMVIPVGNIFQDLKVVDKNSDGSISIRTETSVRYVPLTSKEAQLRGW 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1386 236 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 12 232 IPR000682 GO:0004719|GO:0036211
Aed6g1386 236 CDD AdoMet_MTases 92 195 - -
Aed6g1386 236 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 153 168 IPR000682 GO:0004719|GO:0036211
Aed6g1386 236 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 230 - -
Aed6g1386 236 Gene3D Vaccinia Virus protein VP39 5 236 IPR029063 -
Aed6g1386 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 227 IPR029063 -
Aed6g1386 236 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 3 235 IPR000682 GO:0004719|GO:0036211
Aed6g1386 236 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 3 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1386 Aed-Chr6 18425169 18427467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1386 K00573 - gmx:100527082 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1386 6 18425169 18427467 Aed6g1386 6 18425169 18427467 ECH
Aed6g1386 6 18425169 18427467 Aed10g0866 10 7258408 7260905 PCT