Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0866 ATGAGGGTGCAGTATGGATGCAGCTACTGTTACGCTTATTCTACAAAATTGAAACCCACTCACTCACTCTCTCATCACCGTCGCGTTTCTTTGTCACAACCTCACTCTTCCACCTTCTCCATCATCACCTTCTTCCAAAACCCTAATTTCATCACGGGAAACACTCTCTTCCTTAGGATGCAGAGGTTTGGCTCAGTGAGTGGCGTGAGTAAGAATAAAGCACTGGTAGAGAGGTTGCAGCGCTATGGAGTGATGACGTCAAGTAAGGTGGGTGAAGTGATGGAGAATGTTGATAGAGCGTTGTTTGTACCAGATGGAGCTGCACCTTATGAGGACAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCACCGCATATGCATGCTATGTGTCTTCAGTTGCTTGAGAAGAATTTGCAGCCTGGGATGCACGCTTTGGACGTTGGCTCTGGAACTGGATACTTGACTGCATGCTTTGCTTTGATGGTTGGACCCCAAGGCCGTGCTATTGGTGTGGAGCATATTCCTGAATTGGTTTCTTTTTCAATAGAGAACATACAGAAAAGTGCTGCAGCTACACAACTGAAAGATGGTGCCCTTTCTGTTCATACTGGTGATGGAAGGCAAGGTTGGCCAGAGTTTGCACCCTACGATGCCATTCATGTTGGAGCAGCAGCAGCAGAAATTCCGCAACCACTTATTGACCAGTTGAAGCCTGGAGGGAGAATGGTGATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCACACTGAGACGTCTGTTCGATATGTGCCCCTCACTAGTCGAGAAGCTCAACTGCGAGGTTACTAA 870 0.4678 MRVQYGCSYCYAYSTKLKPTHSLSHHRRVSLSQPHSSTFSIITFFQNPNFITGNTLFLRMQRFGSVSGVSKNKALVERLQRYGVMTSSKVGEVMENVDRALFVPDGAAPYEDSPMAIGYNATISAPHMHAMCLQLLEKNLQPGMHALDVGSGTGYLTACFALMVGPQGRAIGVEHIPELVSFSIENIQKSAAATQLKDGALSVHTGDGRQGWPEFAPYDAIHVGAAAAEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVHTETSVRYVPLTSREAQLRGY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0866 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 258 IPR029063 -
Aed10g0866 289 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 71 283 - -
Aed10g0866 289 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 3 289 - -
Aed10g0866 289 CDD AdoMet_MTases 147 248 - -
Aed10g0866 289 Gene3D Vaccinia Virus protein VP39 66 289 IPR029063 -
Aed10g0866 289 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 206 221 IPR000682 GO:0004719|GO:0036211
Aed10g0866 289 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 3 289 IPR000682 GO:0004719|GO:0036211
Aed10g0866 289 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 70 285 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0866 Aed-Chr10 7258408 7260905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0866 K00573 - gmx:100810913 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0866 10 7258408 7260905 Aed10g0866 10 7258408 7260905 ECH
Aed6g1386 6 18425169 18427467 Aed10g0866 10 7258408 7260905 PCT