Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1381 ATGGAAGTAAAGAAAGTTTTAATATTTGTTGTTCTATCCTTTGCTCTGGTTCTCAGAGTGGCTGAGAGTTTTGATTTCAATGAAAAGGACTTAGAATCCGATGAAGGGTTGTGGGATTTGTACGAAAGATGGAGGAGCCACTACACGGTTTCTCGAAGCCTCGTTGAGAAGCAGAATCGGTTCAACGTGTTCAGAGCCAACGTGATGCATGTCCACAGTTCCAATGCAATGGACAAGCCTTACAAGCTGAAGTTGAACCGGTTCGCTGACATGACAAACCATGAATTCAGGAGCATCTATGCTGGCTCCAAGGAGAATGAACCTGCAGTGACAATTGATGGCCATGAGAATGTACCCACAAATAATGAAGCTGCATTGCTCAAAGCTGTTGCTAATCAACCTGTATCGGTGGCCATTGAAGCTGGGGGAATTGACTTCCAATTCTATTCAGAGGGAGTATTTACGGGAGAGTGTGGCACTGCTCTGGATCATGGGGTAGCAATTGTGGGGTATGGAAAAACAAAAGATGGAACAAAATATTGGACAGTGAAAAATTCATGGGGATCCGAATGGGGAGAAAAGGGTTACATTAGAATGCAAAGGAACATTTCAGACAAGAAAGGTCTATGTGGCATTGCAATGGAGGCTTCCTATCCAATCAAACCAAAGGAACATTCATCATCGTCATATCCTAAAGACGAGCTTTAA 708 0.4322 MEVKKVLIFVVLSFALVLRVAESFDFNEKDLESDEGLWDLYERWRSHYTVSRSLVEKQNRFNVFRANVMHVHSSNAMDKPYKLKLNRFADMTNHEFRSIYAGSKENEPAVTIDGHENVPTNNEAALLKAVANQPVSVAIEAGGIDFQFYSEGVFTGECGTALDHGVAIVGYGKTKDGTKYWTVKNSWGSEWGEKGYIRMQRNISDKKGLCGIAMEASYPIKPKEHSSSSYPKDEL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1381 235 SMART Inhibitor_I29_2 41 96 IPR013201 -
Aed6g1381 235 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 180 199 IPR025661 -
Aed6g1381 235 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 106 226 - -
Aed6g1381 235 SUPERFAMILY Cysteine proteinases 37 220 IPR038765 -
Aed6g1381 235 SMART pept_c1 40 220 IPR000668 GO:0006508|GO:0008234
Aed6g1381 235 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 106 226 - -
Aed6g1381 235 Pfam Papain family cysteine protease 78 220 IPR000668 GO:0006508|GO:0008234
Aed6g1381 235 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 162 172 IPR025660 -
Aed6g1381 235 Gene3D Cysteine proteinases 104 221 - -
Aed6g1381 235 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 21 104 - -
Aed6g1381 235 Gene3D - 24 103 - -
Aed6g1381 235 CDD Peptidase_C1A 103 219 IPR039417 -
Aed6g1381 235 Pfam Cathepsin propeptide inhibitor domain (I29) 41 96 IPR013201 -
Aed6g1381 235 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 21 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1381 Aed-Chr6 18396249 18398854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1381 K16292 - gmx:100806581 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1381 6 18396249 18398854 Aed6g1381 6 18396249 18398854 ECH
Aed6g1381 6 18396249 18398854 Aed10g0860 10 7198514 7199671 PCT