Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0860 ATGAAGAATCTCTTGTGTGTTGTTCTGTCCCTTTCTCTGGTTCTTGGAGTGGCTAATAGCTTTGATTTTCACGACAAGGATTTGGCGTCCGAGGAAAGCTTGTGGGACTTGTACGAGAGATGGAGGAGCCACCACACGGTTTCGCGAAGTCTCGACGACAAGAACAAGCGATTTAACGTGTTCAAAGCAAATGTGATGCATGTCCACAACACTAACAAGATGGATAAGCCTTACAAGCTGAAACTAAACAAGTTTGCAGACATGACCAATCATGAATTCAGAAGCACCTATGCCGGCTCAAAGGTTAATCACCACAGAATGTTCAAAGGCACGCCACGCGGGTTTGGTACCTTCATGTATGAGAAGGTTGAAAGTGTTCCTCCTTCTGTGGATTGGAGGAAGAAAGGTAGTTGCTGGGCTTTTTCAACTGTTGTAGCTGTTGAAGGCATTAACCAAATCAAGACAAATAAATTGGTTTCCTTGTCTGAACAAGTGTTGGTGGACTGTGACACCAAAGAAAATCAAGGATGCAATGGTGGGTTGATGGAATCTGCTTTCGAGTTCATCAAGCAGAATGGTGGCATAACAACAGAAAGCAATTACCCTTACACAGCAAAAGATGGAACTTGTGATGCATCAAAGGTAAATAAATGTTTAAGCTGA 663 0.4299 MKNLLCVVLSLSLVLGVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLDDKNKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHRMFKGTPRGFGTFMYEKVESVPPSVDWRKKGSCWAFSTVVAVEGINQIKTNKLVSLSEQVLVDCDTKENQGCNGGLMESAFEFIKQNGGITTESNYPYTAKDGTCDASKVNKCLS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0860 220 SUPERFAMILY Cysteine proteinases 33 216 IPR038765 -
Aed10g0860 220 Pfam Papain family cysteine protease 127 216 IPR000668 GO:0006508|GO:0008234
Aed10g0860 220 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 18 215 - -
Aed10g0860 220 Gene3D Cysteine proteinases 12 220 - -
Aed10g0860 220 Pfam Cathepsin propeptide inhibitor domain (I29) 38 93 IPR013201 -
Aed10g0860 220 SMART Inhibitor_I29_2 38 93 IPR013201 -
Aed10g0860 220 SMART pept_c1 126 220 IPR000668 GO:0006508|GO:0008234
Aed10g0860 220 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 18 215 - -
Aed10g0860 220 CDD Peptidase_C1A 127 218 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0860 Aed-Chr10 7198514 7199671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0860 K16292 - gmx:548011 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0860 10 7198514 7199671 Aed10g0860 10 7198514 7199671 ECH
Aed6g1381 6 18396249 18398854 Aed10g0860 10 7198514 7199671 PCT