Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1363 ATGGCACCAACTGTACCTATAGAATTTGCTGGTCAAAAGAAATCTAGGAGGTGCTCTCTTTCACAAATAATGGGGAAATCAAGAAAGTACTCTAAAGTTCATGCTACCGGTTTTGTTCCAGATTTTCGTCATGCTGTTGAGACTATGGGTGAATCAGAAGGACTTGGAAGCTTGGGAAGGATTGATAATGGGTTGACAATGTCAGAAGGTTCGTGTGCCCCAAAGAGAAAAAGGGTTGATGAGAGTTTTGATGTGCCATTTCAATTGTTGTCTTTAAGAAAGCTGACCCGTTCTGTGAGAAAGGACTTGAGGCTGAGGTTAAAATCCGAACTTGAAGAAGTAAGGAAAATTCAAAAGAAAATTACCGGTATGTGTTCAACCACTACAGAATTATCTCCATATAGTGACATAAGGAGCTGCAGTGGTGGAGAGAAGAGAGCTCCACTAGAGAGCCAGCATAGTACACTGGAATCATCAGCACTACATGGTAGGAAGCGCCCACCACCAAAGCGTAATGGTTCTAAGACAAAGAGAAGTATTTCTGGGCGTTCAGAATATGCGAAATCTGCTACACCAGTGACTCCTTCATATGCTGCAATGATGAAGCAGTGTGATACATTACTCAACCGTGTTATGTCTCATCAATGTGGGAAGTTTTTTGACAAACCAGTTGACATTGTGAAATGGAATATTCCCGATTATTTCACTGTCATCAAGCACCCGATGGATTTGGGTACTGTGAAGAGTAAACTGATTTCGGGTGAATATTCAAGTCTTATGGATTTTGCTGCAGATGTGCGGCTGACTTTCTCAAATGCAATGACTTATAATCCGCCTGGCAATGATGTGCATGCCATGGCAGAGACACTAAATAAATATTTTGAAACAAGATGGAAGCCTATAGAGAAGAAGATTCTTGTCATTGATGATGTACCATCTGAGCCTTCAAAACTCACTACTTGTGTTGAAACTGAAATTGCTGACCAAATCCCTCCTGTGAAAAAAAAGAAAATAACACCAAATGACACTAATGTCAAGCCAGAGCCCATTAAAAGAATCATGACTGACGAGGAGAAGAAAAAGTTGAGTGAGGAATTGGGACATGTAGAATTACCTGAAAACATAATTGATATCTTGAAGGAGCAAAGTCATAATGCTGGCCAAACAAATGAGGATGAAATTGAGATTGTTATAGATGACCTCAGTGATGATACATTATTTGAAGTGCGGAAGCTTCTTGATGATTTTATGCTAGAGGAGCAAAAAACTCATGCAAAAGCTGGACCATGTGAAAATGAAATTGAGCCTGCCAATGAATCTGGATTTAGCAGTTTATCTGTGCAACCATGTAAAGGCAATGAACCTGTTGAAGAGGACGTGGACATTGTTGATTCAGACAGTGAGTCAGATAGTGAGTCGGACATTGCTAAAGCATCAGAGCCTTTTGATCCTATGAAGGAAAAACTAGAATCTGGCTTGTCTTTAGATCAAAAGGAGGGGAATCTTGACAATTCAGAAACTGGAATTGCTGGCCATGTTGAGCAGAGTTCCCAGATTAATTCAGTTAGTGATGAACCTGAAAACCATCAAGAGGGAGAGAATGCTCCATCTAAGAAGCAAGTATCCCCCGATAAGCTCTACCGTGCAGCTTTACTAAGAAGCCGATTTGCTGATACCATACTTAAAGCTCAGGAAAAGACACTTGAAAAGGGTGACAAGTGGGATCCCGAAAAACTTAGGATGGAGCGAGAAGAGCTCGAAAGGCGGCAGAAGGAGGAGAAAGCTCGATTGCAGGCAGAGGCAAAGGCTGCAGAAGAGGTTCGGAAGAAAGCTGAAGTAGAAGCAGCAGCTGAAGCCAAAAGAAAGAGGGAACTGGAAAGAGAAGCAGCTCGTCAGGCTTTGCAAATGATGGAGAAGACAGTTGATATCAATGAGAGTAGTCAATTTTTGGAAGATCTAGAGATGCTGAGTGGTGCACAACAAGATGAACATTTACCAAATTTCACCGAGGAAAAAAGTCCAGATCATCCTGAAAATGGGTTGGGTAGTTTCAGACTACAGGGCAGTTGTAATCCGTTAGAACAGCTAGGATTGTACATGAAGGCTGATGATGATGATGAGGAAGAAGAACCACCTCAGGGTACTACAGGGAAAACAAATGATGTAGAAGAAGGAGAAATCGATTGA 2187 0.4147 MAPTVPIEFAGQKKSRRCSLSQIMGKSRKYSKVHATGFVPDFRHAVETMGESEGLGSLGRIDNGLTMSEGSCAPKRKRVDESFDVPFQLLSLRKLTRSVRKDLRLRLKSELEEVRKIQKKITGMCSTTTELSPYSDIRSCSGGEKRAPLESQHSTLESSALHGRKRPPPKRNGSKTKRSISGRSEYAKSATPVTPSYAAMMKQCDTLLNRVMSHQCGKFFDKPVDIVKWNIPDYFTVIKHPMDLGTVKSKLISGEYSSLMDFAADVRLTFSNAMTYNPPGNDVHAMAETLNKYFETRWKPIEKKILVIDDVPSEPSKLTTCVETEIADQIPPVKKKKITPNDTNVKPEPIKRIMTDEEKKKLSEELGHVELPENIIDILKEQSHNAGQTNEDEIEIVIDDLSDDTLFEVRKLLDDFMLEEQKTHAKAGPCENEIEPANESGFSSLSVQPCKGNEPVEEDVDIVDSDSESDSESDIAKASEPFDPMKEKLESGLSLDQKEGNLDNSETGIAGHVEQSSQINSVSDEPENHQEGENAPSKKQVSPDKLYRAALLRSRFADTILKAQEKTLEKGDKWDPEKLRMEREELERRQKEEKARLQAEAKAAEEVRKKAEVEAAAEAKRKRELEREAARQALQMMEKTVDINESSQFLEDLEMLSGAQQDEHLPNFTEEKSPDHPENGLGSFRLQGSCNPLEQLGLYMKADDDDEEEEPPQGTTGKTNDVEEGEID 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1363 728 ProSiteProfiles NET domain profile. 344 424 IPR027353 -
Aed6g1363 728 Gene3D - 178 310 IPR036427 GO:0005515
Aed6g1363 728 PANTHER TRANSCRIPTION FACTOR GTE8 464 714 - -
Aed6g1363 728 MobiDBLite consensus disorder prediction 497 525 - -
Aed6g1363 728 PANTHER TRANSCRIPTION FACTOR GTE10 464 714 - -
Aed6g1363 728 PANTHER TRANSCRIPTION FACTOR GTE10 68 463 - -
Aed6g1363 728 MobiDBLite consensus disorder prediction 470 494 - -
Aed6g1363 728 PRINTS Bromodomain signature 247 265 IPR001487 GO:0005515
Aed6g1363 728 PRINTS Bromodomain signature 265 284 IPR001487 GO:0005515
Aed6g1363 728 PRINTS Bromodomain signature 231 247 IPR001487 GO:0005515
Aed6g1363 728 SUPERFAMILY Bromodomain 195 305 IPR036427 GO:0005515
Aed6g1363 728 Pfam Bromodomain 204 288 IPR001487 GO:0005515
Aed6g1363 728 Coils Coil 100 120 - -
Aed6g1363 728 CDD Bromo_plant1 200 298 IPR037377 -
Aed6g1363 728 Gene3D - 348 423 IPR038336 -
Aed6g1363 728 MobiDBLite consensus disorder prediction 424 544 - -
Aed6g1363 728 MobiDBLite consensus disorder prediction 136 188 - -
Aed6g1363 728 Coils Coil 580 635 - -
Aed6g1363 728 MobiDBLite consensus disorder prediction 655 728 - -
Aed6g1363 728 Pfam Bromodomain extra-terminal - transcription regulation 354 414 IPR027353 -
Aed6g1363 728 SMART bromo_6 193 303 IPR001487 GO:0005515
Aed6g1363 728 PANTHER TRANSCRIPTION FACTOR GTE8 68 463 - -
Aed6g1363 728 ProSiteProfiles Bromodomain profile. 212 284 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1363 Aed-Chr6 18277290 18283781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1363 - - gmx:100787770 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0827 10 6903944 6909177 Aed6g1363 6 18277290 18283781 ECH
Aed6g1363 6 18277290 18283781 Aed6g1363 6 18277290 18283781 ECH