Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0827 ATGGCACCAACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCCAGAAAGCACTCTCATTCACAGAATATGGGGAAATCTAGGAAATACTCCAAAGGTTACTCCACTGGCTTTGTTCCTGATTTTCGGCATGCTGTTGAGACTATGGGTGAATCAGAAGGGTTGGGTAGCTTGGGGAGGGTTGAAATGGAACTGGCGGCATCAGCAGATTCTTGTGCACCGAAGAGGAAATGCCCTAGCTCAAATGCTGGTGGTTATGGTAGTTTTGATGTACCATTTCAACAATTGTCATTATCGGTGATGTCAGGGTTTGAGAGAAAGGATTTGAAATTGAAGTTAACCTGGGAACTTGAAAAAGTAAGGCAGTTTCAGAAGAAAATTGATGGTATGAACTCAAGTGTTGCTGGACTGTCTTCCTCTAGTGACATAAGGAGCTGCAGTGCAGGGCAGAAGAGGCCTAAGCTGGAGAGCCAGCACAAGACAATGGAATTATCGGCGCCACATGGTAAGAAAAGACCCTTACCAGGACATAATGGTTCCAAGACAAAGAAAAGTATGTCTGGGCGTATTGAATGTGCAAAACCTGCTGCGCCAGTGACTTCATATGCTACATTGATGAAAATGTGTGAGAATACACTAAACCGAATGATGTCTCATCAATTTGGTTGGGTTTTTAACACTCCAGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCAATGTCATCAAGCATCCAATGGATTTGGGTACTGTGAAGAGGAGAATAACCTCTGGTGAGTATTCAAATCCCATGGATTTTGCTGCTGATGTGCGGCTGACTTTCAAAAATGCAATGTCTTATAATCCAGCTGGCAATGATGTACACATCATGGCAGAGACCCTTAGTAAATTTTTTGAAACAAGATGGAAGGCCATTGAGAAGAAAATGCCTGTAATTGATTGTGTTGCATCTGAGCCTTCAAGACCTACTTGTTTGGATACAGAAATTTCTGACCGAGTTCCTCCCACGAAAAAGAAGAAAATAACACCAAATGATACCAAAGTCAAGCCAGAGCCTGTTAAAAGAATCATGGCCATAGAAGAGAAGCAAAAAATGAGTCAAGAGTTGGAGGCAATGCTTGGAGAGCTGCCTGATAGCATTGTTGATTTTTTGAGAGAGCAAAGTTATAATGAAGGGCAAACCAATGAGGATGAAATTCTTCTGAATGAATCAGGATTCAGCAATTCATCTATGCAACCCTGCAAAGATGCAGGCAATGAACAGGTTGAGGAGGATGTGGACATTATTGGTGGGAATGATCCTCCTATTTCAAATTATCCTCCATTAGAGATTGAAAAAGATAGTACCAATAGAAACAGTAAATGCAGTAGCTCAAGCAGCTCTAGTAGTGAATCTGGTTCTTCATCCAGTGATTCAGACTCAGGTAGTTCATCTGCTAGTGAGTTGGATATGGCTAAAACATCAGAACCCCTTAGTGCCACTAAGGAAAATGTAGGTCCTGGCTTGACTTCAGATCAAAACAAAGGGGATCCTGATTCAATAAATGTGGGAGGCCAAGTTGAGCAGGATTCCCAGAGTAGGCCTGTTGCTACTGAACCAGAAAGCCATCAAGAGGGGGAGAGTGCTGCATCTAAGAGGCAAGTCTCTCCTGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGTTTTGCTGACACCATACTTAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAGAAGCGAGATCCTGAAAAACTTAGGATTGAGCGTGAAGATCTTGAAAGGCGGCATAAAGAAGAGAAAGCTCGGTTGCAGGCTGAGGCAAAGGCTGCAGAAGAAGCTCAGAAGAAAGCCGAAGCAGAAGCTGCAGTGGAAGCCAAAAGGAAAAGGGAACTGGAAAGAGAAGCAGCTCGCCAGGCTTTGCAAAAGATGGAGAAAACTGTTGATATCAACGAGAGCAGTCAATTTTTGGAAGATCTAGAGATGCTGAGTGCTGTACATGATATTGAACGTCTGCCAAGTTTCAAAGAGGAGACATGCGCAGATCAACCTGAAAATGGATTGGGTGGGATCAAGCTACAGGGAAATCCCCTTGAACAGCTAGGGTTGTACATGAAGGATGAGGAGGAGGAAGAAGAGGAGGAACTGCCTCCAAGTGGTGCCACAGGACCATCAAATGATGTGGAAGAAGGAGAAATTGATTGA 2208 0.4321 MAPTVPIEFAGQKESRKHSHSQNMGKSRKYSKGYSTGFVPDFRHAVETMGESEGLGSLGRVEMELAASADSCAPKRKCPSSNAGGYGSFDVPFQQLSLSVMSGFERKDLKLKLTWELEKVRQFQKKIDGMNSSVAGLSSSSDIRSCSAGQKRPKLESQHKTMELSAPHGKKRPLPGHNGSKTKKSMSGRIECAKPAAPVTSYATLMKMCENTLNRMMSHQFGWVFNTPVDVVKLNIPDYFNVIKHPMDLGTVKRRITSGEYSNPMDFAADVRLTFKNAMSYNPAGNDVHIMAETLSKFFETRWKAIEKKMPVIDCVASEPSRPTCLDTEISDRVPPTKKKKITPNDTKVKPEPVKRIMAIEEKQKMSQELEAMLGELPDSIVDFLREQSYNEGQTNEDEILLNESGFSNSSMQPCKDAGNEQVEEDVDIIGGNDPPISNYPPLEIEKDSTNRNSKCSSSSSSSSESGSSSSDSDSGSSSASELDMAKTSEPLSATKENVGPGLTSDQNKGDPDSINVGGQVEQDSQSRPVATEPESHQEGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRHKEEKARLQAEAKAAEEAQKKAEAEAAVEAKRKRELEREAARQALQKMEKTVDINESSQFLEDLEMLSAVHDIERLPSFKEETCADQPENGLGGIKLQGNPLEQLGLYMKDEEEEEEEELPPSGATGPSNDVEEGEID 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0827 735 MobiDBLite consensus disorder prediction 133 147 - -
Aed10g0827 735 MobiDBLite consensus disorder prediction 153 167 - -
Aed10g0827 735 MobiDBLite consensus disorder prediction 428 551 - -
Aed10g0827 735 PANTHER TRANSCRIPTION FACTOR GTE8 25 400 - -
Aed10g0827 735 PANTHER TRANSCRIPTION FACTOR GTE8 403 721 - -
Aed10g0827 735 MobiDBLite consensus disorder prediction 1 33 - -
Aed10g0827 735 MobiDBLite consensus disorder prediction 444 533 - -
Aed10g0827 735 SUPERFAMILY Bromodomain 186 312 IPR036427 GO:0005515
Aed10g0827 735 MobiDBLite consensus disorder prediction 133 190 - -
Aed10g0827 735 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Aed10g0827 735 MobiDBLite consensus disorder prediction 677 735 - -
Aed10g0827 735 MobiDBLite consensus disorder prediction 574 620 - -
Aed10g0827 735 Gene3D - 190 315 IPR036427 GO:0005515
Aed10g0827 735 Coils Coil 591 648 - -
Aed10g0827 735 SMART bromo_6 198 308 IPR001487 GO:0005515
Aed10g0827 735 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Aed10g0827 735 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Aed10g0827 735 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Aed10g0827 735 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Aed10g0827 735 PANTHER TRANSCRIPTION FACTOR GTE10 25 400 - -
Aed10g0827 735 PANTHER TRANSCRIPTION FACTOR GTE10 403 721 - -
Aed10g0827 735 CDD Bromo_plant1 205 303 IPR037377 -
Aed10g0827 735 Pfam Bromodomain 209 293 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0827 Aed-Chr10 6903944 6909177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0827 - - gmx:100776368 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0827 10 6903944 6909177 Aed6g1363 6 18277290 18283781 ECH
Aed10g0827 10 6903944 6909177 Aed10g0827 10 6903944 6909177 ECH