Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed6g1343 | ATGATGGCAATGGCAGCAACAATGGGAGAGAGTCCACGAAGCCCAGAAGCGAAGTTGGGGATGCGAGTGGAAGATCTTTGGGACATCCAGGAGGCACAGCTAAGCCCTACTGAGAAACTCAACGCGTGTTTTGAAAGCATCCCTGTCTCTGCTTTTCCCTTGGATTCTTCAAACAGAGAAATTGAGATAAAATCAGACGCGACCCTAGCAGAAGCTGTTGAGATACTGGCACAAAACAACGTTTTCAGCGCACCTGTGGTGGATGTTGACGCTTCTGAAGATGCTAGTTGGATGGACAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTTTGCATCAGGTTGGTGATATTTCAGGGACATTCCGTTGGGCCCCGTTTCTTGCTCTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGTTGGATTTAGGCTCTGGTTCAATTGATAACATTATTACACAGTCTGCTGTGATTCATATGCTGTCAGAATGCGCTGGACTTCAGTGGTTCGAAAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCCTTGTGACACCAAATGAGATCATAAAGGTAGCTATTACAGTACAAGACTTCCTAACTGAGGTTAGAGGCTACTTGGAGAAGAATAAAGATGCATCCCTATTGTTAAGTGAATATGTTACATGCAAACGGGACTGTACAATCAAAGAGTTGATTCAACTGCTTGATCAAGAGAAGATTCATAGAGTCTATGTGGTGGATGATGATGGGAATCTGCAAGGACTAATCACACTAAGAGACATCATCTCAAGGCTAGTACATGAACCGCGCGGCTATTTTGGTGATTTCTTTGATGGTTTTCTGCCTGCAAACACCAGAGTTTAA | 921 | 0.4354 | MMAMAATMGESPRSPEAKLGMRVEDLWDIQEAQLSPTEKLNACFESIPVSAFPLDSSNREIEIKSDATLAEAVEILAQNNVFSAPVVDVDASEDASWMDRYIGIVEFAGIVVWILHQVGDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGSIDNIITQSAVIHMLSECAGLQWFESWGTKKLSEVGLPLVTPNEIIKVAITVQDFLTEVRGYLEKNKDASLLLSEYVTCKRDCTIKELIQLLDQEKIHRVYVVDDDGNLQGLITLRDIISRLVHEPRGYFGDFFDGFLPANTRV | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed6g1343 | 306 | Gene3D | - | 41 | 184 | IPR046342 | - | |
| Aed6g1343 | 306 | Pfam | CBS domain | 235 | 285 | IPR000644 | - | |
| Aed6g1343 | 306 | SUPERFAMILY | CBS-domain pair | 32 | 178 | IPR046342 | - | |
| Aed6g1343 | 306 | SMART | cbs_1 | 129 | 178 | IPR000644 | - | |
| Aed6g1343 | 306 | SMART | cbs_1 | 237 | 285 | IPR000644 | - | |
| Aed6g1343 | 306 | SMART | cbs_1 | 59 | 115 | IPR000644 | - | |
| Aed6g1343 | 306 | SUPERFAMILY | CBS-domain pair | 212 | 294 | IPR046342 | - | |
| Aed6g1343 | 306 | ProSiteProfiles | CBS domain profile. | 54 | 121 | IPR000644 | - | |
| Aed6g1343 | 306 | PANTHER | SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED | 9 | 117 | - | - | |
| Aed6g1343 | 306 | ProSiteProfiles | CBS domain profile. | 234 | 292 | IPR000644 | - | |
| Aed6g1343 | 306 | Gene3D | - | 190 | 287 | IPR046342 | - | |
| Aed6g1343 | 306 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 211 | 306 | - | - | |
| Aed6g1343 | 306 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 9 | 117 | - | - | |
| Aed6g1343 | 306 | CDD | CBS_pair_SF | 236 | 289 | - | - | |
| Aed6g1343 | 306 | PANTHER | SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED | 211 | 306 | - | - | |
| Aed6g1343 | 306 | CDD | CBS_pair_SF | 63 | 174 | - | - | |
| Aed6g1343 | 306 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 118 | 210 | - | - | |
| Aed6g1343 | 306 | PANTHER | SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED | 118 | 210 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed6g1343 | Aed-Chr6 | 18122877 | 18126513 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed6g1343 | - | - | gmx:100780629 | 425.246 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aed6g1343 | 6 | 18122877 | 18126513 | Aed6g1343 | 6 | 18122877 | 18126513 | ECH | |
| Aed6g1343 | 6 | 18122877 | 18126513 | Aed10g0809 | 10 | 6704587 | 6709512 | PCT |