Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed10g0809 | ATGGTAACAATGGAGGAAGAGAGTCCAAGGAGTCCAGAGGCGAAACTGGGGTTGCGAGTGGAGGATCTATGGGACATTCAGGAACCACAGCTAAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAAAGCATACCTGTCTCTGCCTTCCCTCCACCTCCTTCAAATCAAGGAATTGAGATAAAATCAGATGCCACCCTAGCCGAGGCAGTTAAAATACTTGCACAACACAACATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCAGAAGATGCTGGTTGGATTGACAGATATATAGGAATAGTTGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGAGCTGCTAATACGGCTGCAGTTCGTGACATTTCAGGGTCATTCCGATGGGCGCCATTTCTGGCTTTGGAGAGATCAAACTCATTTCTGACCATGCTTTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGGTGGACTTAGGTGCAGGTCGAATTGACAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACTAAGAAACTATCTGAAGTTGGTCTTCCCATGGTGACACCAAATCAAATTATCAAGGTTCATGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGAATTGGAGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGAAAGATGTTCAATTCCTCCTAACTGCTCCTGAAATCTACCACGATTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGTTAGAAGCTACTTTGAGAAGCATCATGAAGGGGCCTTTCCAATGTCAGGTGACCTTATTACATGCAACAAGGATTGCACCATCAAAGAACTCATTCAACTGCTTGACCATGAGAAGATTCATAGAGTCTACGTTGCTGACAACGATGGGAATCTTGAAGGACTAATCACACTCAGAGATATTATCTCAAGGCTAGTGCATGAGCCTCGTGGCTATTTTGGTGATTTCTTTGATGGGGTTCTCCCTATGCCTCTAAACAGCAGGGTTTGA | 1137 | 0.4459 | MVTMEEESPRSPEAKLGLRVEDLWDIQEPQLSPDEKLNACFESIPVSAFPPPPSNQGIEIKSDATLAEAVKILAQHNILSAPVVDVDAPEDAGWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGAANTAAVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIDNIITQSSVIHMLAECAGLQWFESWGTKKLSEVGLPMVTPNQIIKVHEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLKDVQFLLTAPEIYHDYRSITAKDFLTAVRSYFEKHHEGAFPMSGDLITCNKDCTIKELIQLLDHEKIHRVYVADNDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPLNSRV | 378 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed10g0809 | 378 | ProSiteProfiles | CBS domain profile. | 53 | 118 | IPR000644 | - | |
| Aed10g0809 | 378 | SUPERFAMILY | CBS-domain pair | 215 | 364 | IPR046342 | - | |
| Aed10g0809 | 378 | SUPERFAMILY | CBS-domain pair | 30 | 193 | IPR046342 | - | |
| Aed10g0809 | 378 | Gene3D | - | 47 | 199 | IPR046342 | - | |
| Aed10g0809 | 378 | PANTHER | SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED | 129 | 378 | - | - | |
| Aed10g0809 | 378 | PANTHER | SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED | 6 | 118 | - | - | |
| Aed10g0809 | 378 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 6 | 118 | - | - | |
| Aed10g0809 | 378 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 129 | 378 | - | - | |
| Aed10g0809 | 378 | Gene3D | - | 206 | 357 | IPR046342 | - | |
| Aed10g0809 | 378 | ProSiteProfiles | CBS domain profile. | 216 | 278 | IPR000644 | - | |
| Aed10g0809 | 378 | CDD | CBS_pair_SF | 221 | 351 | - | - | |
| Aed10g0809 | 378 | ProSiteProfiles | CBS domain profile. | 304 | 362 | IPR000644 | - | |
| Aed10g0809 | 378 | SMART | cbs_1 | 144 | 193 | IPR000644 | - | |
| Aed10g0809 | 378 | SMART | cbs_1 | 307 | 355 | IPR000644 | - | |
| Aed10g0809 | 378 | SMART | cbs_1 | 56 | 112 | IPR000644 | - | |
| Aed10g0809 | 378 | SMART | cbs_1 | 221 | 270 | IPR000644 | - | |
| Aed10g0809 | 378 | CDD | CBS_pair_SF | 60 | 189 | - | - | |
| Aed10g0809 | 378 | Pfam | CBS domain | 60 | 103 | IPR000644 | - | |
| Aed10g0809 | 378 | Pfam | CBS domain | 221 | 265 | IPR000644 | - | |
| Aed10g0809 | 378 | Pfam | CBS domain | 304 | 355 | IPR000644 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed10g0809 | Aed-Chr10 | 6704587 | 6709512 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed10g0809 | - | - | gmx:100780629 | 686.026 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aed10g0809 | 10 | 6704587 | 6709512 | Aed10g0809 | 10 | 6704587 | 6709512 | ECH | |
| Aed6g1343 | 6 | 18122877 | 18126513 | Aed10g0809 | 10 | 6704587 | 6709512 | PCT |