Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1315 ATGGAACGTGCTCGCAGGCTAGCAAACCGCGCCATTCTGAGGCGTCTGGTTTCAGAGGCAAAGCAGCACCAGAAGAATGAATCCGTGCTGCACTCTTCTTCCACCACCACCACTACCCCCATGTTGCTCTACTCTTCCTCCAGGTGCATGTCCTCTGTTTCTTCCCCTGCTCTGCGAAACAGGGGATCATCCAAAGCAGAGAGCCTCTTAGGAAGAAACATGAACTTCACCACCACCAGCATGCCACGCGGAGGCGTTGTTGCTGGTGGTGGTTTTCTCGGCAGAGGCGCCGGCTCAGCCCGATCCATCTCGGTTGAAGCGCTTCAACCGAGTGACACCTTCGCCCGGCGCCACAACTCTGCCACCCCAGAGGAACAGAGCAAGATGGCAGAGTCATGCGGCTTCGAGAGCCTCGACACACTTGTAGACGCCACCGTGCCCAAGTCCATTCGCCTGAAGGAGATGAATGTCGATTCTTCTGGAAAGACTGCTTTGAGGATGGCAATGCAAACTAGGGAGCAGCATATCAGGAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTTTATCATGGACCTGAAGGCCTTAAGAACATTTCACACCGTGTTCATGGTCTTGCTGGGGCATTTGCTCTTGGACTAAAGAAACTTGGAACTGTGGAAGTTCAGGACCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTTCCAATGCACACGCAATTGCTGATGCTGCTATCAAAAGTGAAATAAATTTGAGAGTTGTTGATGGAAACACTGTCTCCTTCACAGCTGCATCTCTTGCTCCAGAAGTTCAGAGTTCGATTCCTTCTGGATTAGTTAGGAAGAGCCCTTATCTGACGCACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTTAGGTACTTGTATAGGCTACAATCAAAAGATCTCTCACTATGCCACAGTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCCAACTTTACTGATATTCACCCTTTTGCACCAGTTGACCAGACTCAAGGTTATCAGGAAATGTTCAACAATTTGGGTGAACTGTTGTGCACCATCACTGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTTATGGTTATTCGTGCATATCATTTGGCAAGAGGAGACCCCCACCGCAACGTTTGCATTATACCTGTCTCAGCACATGGTACAAACCCCGCCAGTGCTGCTATGTGTGGAATGAAAATTGTCTCCGTTGGAACTGACGCCAAGGGAAACATTAATATTGAAGAGTTGAGAAAGGCTGCTGAAACACATAAGGACAACTTATCTGCACTTATGGTAACATATCCTTCGACTCACGGTGTTTACGAGGAAGGTATTGATGAAATTTGCAAGATTATTCATGATAATGGAGGCCAAGTGTATATGGATGGTGCCAACATGAATGCTCAGGTGGGACTCACAAGCCCAGGTTGGATAGGTGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACATTTGGCACCATTTTTACCTTCACACCCTGTGATAGCAACTGGTGGAATTCCTGCCCCTGAGAACCCTCAACCACTTGGTACCATCTCTGCTGCACCATGGGGATCAGCACTCATATTGCCAATCTCTTACACTTACATAGCCATGATGGGTTCTAAAGGACTCACTGATGCATCAAAAATAGCCATTTTGAATGCAAACTACATGGCAAAACGATTGGAGAATTATTACCCGGTTCTTTTCCGCGGAGTCAATGGAACAGTTGCTCATGAATTCATCATTGACTTGAGAGGCTTTAAGATTACTGCTGGAATTGAGCCTGAAGATGTTGCAAAGCGCCTCATGGACTACGGTTTTCATGCACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCTACTGAGAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCCATCAGAGAAGAAATTGGTGAGATTGAGAAAGGAAAGGCTGACATTAACAACAATGTACTTAAGGCCGAAAATCATGAGTTTTGTTATGTACTATGTAGACGTGTTGATAATGTGTACGGTGACCGCAACCTCATTTGCACCCTTCTCCCAGCATCACAGGCTGCTGAAGAACAAGCTGCTGCCACAGCCTAG 2310 0.4732 MERARRLANRAILRRLVSEAKQHQKNESVLHSSSTTTTTPMLLYSSSRCMSSVSSPALRNRGSSKAESLLGRNMNFTTTSMPRGGVVAGGGFLGRGAGSARSISVEALQPSDTFARRHNSATPEEQSKMAESCGFESLDTLVDATVPKSIRLKEMNVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKNISHRVHGLAGAFALGLKKLGTVEVQDLPFFDTVKVKTSNAHAIADAAIKSEINLRVVDGNTVSFTAASLAPEVQSSIPSGLVRKSPYLTHPIFNTYQTEHELLRYLYRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPNFTDIHPFAPVDQTQGYQEMFNNLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDPHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIEELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIATGGIPAPENPQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKITAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIGEIEKGKADINNNVLKAENHEFCYVLCRRVDNVYGDRNLICTLLPASQAAEEQAAATA 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1315 769 SUPERFAMILY PLP-dependent transferases 286 754 IPR015424 -
Aed6g1315 769 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 739 769 - -
Aed6g1315 769 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 155 732 IPR020581 GO:0004375|GO:0006546
Aed6g1315 769 Gene3D Aspartate Aminotransferase, domain 1 207 263 IPR015422 GO:0003824
Aed6g1315 769 Pfam Glycine cleavage system P-protein 154 275 IPR020581 GO:0004375|GO:0006546
Aed6g1315 769 Pfam Glycine cleavage system P-protein 283 559 IPR020581 GO:0004375|GO:0006546
Aed6g1315 769 Gene3D - 151 206 IPR015421 GO:0003824
Aed6g1315 769 Gene3D - 348 575 IPR015421 GO:0003824
Aed6g1315 769 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 155 732 - -
Aed6g1315 769 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 156 - -
Aed6g1315 769 Coils Coil 456 476 - -
Aed6g1315 769 CDD GDC-P 309 704 IPR020581 GO:0004375|GO:0006546
Aed6g1315 769 Gene3D Aspartate Aminotransferase, domain 1 596 732 IPR015422 GO:0003824
Aed6g1315 769 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 156 IPR020581 GO:0004375|GO:0006546
Aed6g1315 769 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 739 769 IPR020581 GO:0004375|GO:0006546
Aed6g1315 769 SUPERFAMILY PLP-dependent transferases 154 259 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1315 Aed-Chr6 17903208 17910505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1315 K00281 - gmx:100819714 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1315 6 17903208 17910505 Aed4g1639 4 21049047 21055438 PCT