Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1639 ATGGAACGTGCACGGAGGCTGGCAAACAGAGCGATTCTGAAGAATCTAGTTTCTTCAGCGAAGGACAATTCCCATTTGCGGCGTTCTCTGTCATCTGTTTCCCATTCCCTTTTAAAATCCAAACCAGAGAACTACTCGATCGGAAGCAACAGAAAGCTCTTAAACAATGTCCAATCTCGATCCATCTCACTGGAGGCGCTTAAGCCGAGTGACACGTTCCCCCGGCGCCACAACTCCACCACCACGGAGGAACAAACCAAGATGGCGCAAACGTGCGGGTTCGAGAGCCTGAACTCCCTGATCGACGCCACCGTTCCGAAATCAATCCGCCTGGACGACATGTCTGTTGATTCTTGTGGAAAGCCGGCTTTGAGAATGGCCATGCAAACTAGGGAGCAGCATATCCGGAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATATCATGGCCCTGAAGGACTTAAAACTATTGGCCAGCGGGTTCATGGTCTTGCTGCGGTGTTTGCCCAGGGACTAAAGAAACTTGGAACCGTGGAAGTTCAAGACCTTCCATTTTTTGACACTGTGAAAATTAAGACTGCCAATGCCCATGCAATTGCTGATGCTGCTCACAAGAGTGAAATAAATCTGCGGGTTGTTGATGGGAACACTATCACTGTCGCCTTTGATGAAACAACCACCTTGGAGGATGTTGATAATCTTTTCAAAGTTTTTTCTGATGGCAAACCTGTCTCCTTCACAGCTGCATCTCTTGCACCAGAAGTTCAGACTGGACTTCCTTCTGGACTTAATAGAAAGAGTCCTTATCTGACACATCCTATCTTTAACACGTACCACACTGAGCATGAGTTGCTCAGGTACATTCATAGGCTACAATCAAAAGATCTTTCGTTGTGCCACAGTATGATCCCACTGGGATCTTGTACAATGAAACTGAATGCTACAACTGAAATGATGCCTGTGACATGGCCTAGCTTTGCTAACATTCACCCTTTTGCACCAATTGAACAGGCTCAAGGTTATCAGGAAATGTTCGGAAATTTGGGTAAACTGTTGTGTACAATCACCGGGTTTGACTCCTTCTCTTTGCAACCTAATGCTGGTGCTGCTGGAGAATATGCTGGACTGATGGTTATTCGTGCATATCATTTGGCAAGAGGAGACCACCACCGCAATGTCTGCATTATACCTGTCTCAGCACATGGTACAAATCCGGCCAGTGCTGCCATGTGTGCAATGAAAATTGTATCTGTTGGAACTGATTCCAAGGGAAACATCAATATTGAAGAGTTGAGGAAGGCTGCAGAAACTCATAAGGACAATCTATCTGCACTGATGGTAACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGAGATATGCAAGATTATTCATGATAACGGAGGTCAAGTATATATGGATGGTGCTAACATGAATGCACAGGTGGGACTTACAAGTCCAGGTTGGATTGGAGCAGATGTTTGCCATCTGAATCTTCATAAGACATTTTGCATACCACATGGAGGAGGTGGCCCGGGTATGGGTCCTATTGGAGTAAAGAAACACTTGGCACCGTTTTTACCATCACATCCAGTGGTTTCCACTGGTGGCATTCCTGCCCCTGACAAGTCACAACCACTTGGTGCCATTTCTGCTGCACCATGGGGTTCAGCACTGATATTGCCTATCTCATACTCTTACATAGCCATGATGGGTTCTAAAGGACTCACTGAAGCTTCAAAAACAGCCATTTTGAATGCAAACTATATGGCAAAACGATTGGAGAATCATTACCCTGTTGTTTTCCGTGGGGTCAATGGAACAGTTGCTCATGAATTCATTATTGACTTAAGAAGTTTTAAGAATACTGCTGGGATAGAACCTGAAGATGTTGCAAAGCGCCTTATGGACTATGGCTTCCATAGTCCGACAATGTCATTTCCAGTGCCTGGCACACTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCCGAGCTAGACAGGTTTTGTGAAGCTCTTATTTCCATCCGACAAGAAATTGCTGAGATTGAGAAAGGAAAGGCTGACATTAACAACAATGTTCTTAAGAGTTCCCCTCATCCACCATCAGTGCTCATGGGAGATTCATGGACTAAACCATACTCTCGAGAATATGCTGCCTTCCCAGCCTCTTGGCTCCGTGTTTCTAAGTTCTGGCCTTCCACAGGACGTATTGATAATGTGTACGGTGACCGCAACCTCGTTTGCTCCCTTGTCCCAGCATCACAGGTTGTTGAAGAACAATCTGCTGCAACGGCCTAA 2349 0.4568 MERARRLANRAILKNLVSSAKDNSHLRRSLSSVSHSLLKSKPENYSIGSNRKLLNNVQSRSISLEALKPSDTFPRRHNSTTTEEQTKMAQTCGFESLNSLIDATVPKSIRLDDMSVDSCGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIGQRVHGLAAVFAQGLKKLGTVEVQDLPFFDTVKIKTANAHAIADAAHKSEINLRVVDGNTITVAFDETTTLEDVDNLFKVFSDGKPVSFTAASLAPEVQTGLPSGLNRKSPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPIEQAQGYQEMFGNLGKLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCAMKIVSVGTDSKGNINIEELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPDKSQPLGAISAAPWGSALILPISYSYIAMMGSKGLTEASKTAILNANYMAKRLENHYPVVFRGVNGTVAHEFIIDLRSFKNTAGIEPEDVAKRLMDYGFHSPTMSFPVPGTLMIEPTESESKAELDRFCEALISIRQEIAEIEKGKADINNNVLKSSPHPPSVLMGDSWTKPYSREYAAFPASWLRVSKFWPSTGRIDNVYGDRNLVCSLVPASQVVEEQSAATA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1639 782 Coils Coil 441 461 - -
Aed4g1639 782 CDD GDC-P 294 689 IPR020581 GO:0004375|GO:0006546
Aed4g1639 782 SUPERFAMILY PLP-dependent transferases 290 767 IPR015424 -
Aed4g1639 782 SUPERFAMILY PLP-dependent transferases 113 250 IPR015424 -
Aed4g1639 782 TIGRFAM gcvP: glycine dehydrogenase 114 766 IPR003437 GO:0004375|GO:0006544
Aed4g1639 782 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 114 782 IPR020581 GO:0004375|GO:0006546
Aed4g1639 782 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 115 IPR020581 GO:0004375|GO:0006546
Aed4g1639 782 Pfam Glycine cleavage system P-protein 113 251 IPR020581 GO:0004375|GO:0006546
Aed4g1639 782 Pfam Glycine cleavage system P-protein 284 544 IPR020581 GO:0004375|GO:0006546
Aed4g1639 782 Gene3D - 333 585 IPR015421 GO:0003824
Aed4g1639 782 Gene3D - 104 165 IPR015421 GO:0003824
Aed4g1639 782 Gene3D Aspartate Aminotransferase, domain 1 586 721 IPR015422 GO:0003824
Aed4g1639 782 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 114 782 - -
Aed4g1639 782 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1639 Aed-Chr4 21049047 21055438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1639 K00281 - gmx:100795673 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1315 6 17903208 17910505 Aed4g1639 4 21049047 21055438 PCT