Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1250 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAGAGTGATGGAAAATCTATCAGGTATATATCATCTGAATTGGCTACTGATATTATCATAACTGTTGGTGAAGTTAAGTTTCACCTGCACAAGTTCCCTCTACTGTCCAAGAGTAATTGTTTACAGAAGTTGCTGTCAAAGGCTAATGAAGAGAGTTCTGATGAAACTCAATTGGATGGTTTTCCTGGTGGTCCTAAGGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTCGTGGCTGCTCGTTGTGCTGCTGAGTATCTTCAGATGACTGAGGATATTGATAAAGGGAACTTGATTTTCAAAATCGAGGTGTTTCTTACCTCAAGTATCTTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTGCCTTGGTCTGAGGACCTAAAGATTGTTGGGAGATGTATCGATTCCATAGCTTCTAAGACTTCTGTGGATCCTGCAAACATCACTTGGTCTTACACTTACAACCGTAAGTTATCAGAACTCGATAAAATTGTTGAGGACAAGGTAACGCCACAAGAGAAAATCGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTATAAACGAGTGATGATCACTGTCAAGTCAAAGGGAAGAATGGACGGAGTTGTGATTGGCGAGGCATTGAAAATCTATGCTGTAAGATGGTTGCCTGACTCTGTTGATGCATTGGTTTCTGATGCTCATGCCTGGAGGAACAAGTCTCTGGTGGAAACAATTGTCTGTTTGTTGCCTTGTGATAATGGTGTGGTGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCAATATTGGTTGAAGCCGACGAGACTTCGAGGGGACAGTTGATGAAGAGCATTGGCCTAAAGTTGAACGAAGCTTCTGTCAAGGATTTGCTGATTCCAGCAAGGTTTCCCCAGAATACCAAATATGATGTTGATTTGGTGCAAGATCTTTTGAATCTGTACATGGCTAACATAAAGGGAAGCCATGATATGGCTGAGGTTGAGGAGAAGAAGGAGAAAGCGAATGGCGAGTCAATTTTAGGACAGAGGTCTTTATTGAATGTTGGCAAGTTGGTAGATGGATATCTTGGAGAAATTGCACATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAATTCCAGAGTTTGCTAGACCAAATCATGATGGTCTCTACAGAGCTATAGACATCTACTTGAAGGGGCACCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAATGGATGCCAAGAAATTGACAGTGGAGGCATCAATGCATGCTGCACAGAATGAACGTCTCCCTCTTCGAGTTGTGGTGCAGGTTCTCTACTTTGAGCAGGTTAGAGCTGCGTCCAACGCTCGTGTGCTTGGCAACAGTCCACGTAACTCCATAAACACTCAAGTCAATGGAGGAGATGAGGAGTGTGATAAATTGGGAGGCGAGAGCTGCCGCCAATCCCTCAACAGCCAGACGTGTCACACAAAGGTTCGAGATGGAGAGTTCCAACAGAAGAACGGGAAGTTGAACAAGAAGAGTAGCAAAAACAGCAGAAGTGGCATACAGTTGCTGCCATCTAGATCAAGGAGAATCTTTGACAAGTTATGGATAGTAGGAAAAGTACAAGAAAATAAAAGCTCTGAGACTTCAGGGAGTTCTAATAGCCCAACTTCTGTAGTCCCTGGAGACACCAAATCATCAGGTTCATCACTGAGACACAGGAGGCATTCCATCTCTTAG 1863 0.4267 MKFMKLGSKPDALQSDGKSIRYISSELATDIIITVGEVKFHLHKFPLLSKSNCLQKLLSKANEESSDETQLDGFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLQMTEDIDKGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKVTPQEKIESVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCDNGVVGCSCSFLLKLLKVAILVEADETSRGQLMKSIGLKLNEASVKDLLIPARFPQNTKYDVDLVQDLLNLYMANIKGSHDMAEVEEKKEKANGESILGQRSLLNVGKLVDGYLGEIAHDPNLSLSSFVDLSQSIPEFARPNHDGLYRAIDIYLKGHPSLTKAERKKICGLMDAKKLTVEASMHAAQNERLPLRVVVQVLYFEQVRAASNARVLGNSPRNSINTQVNGGDEECDKLGGESCRQSLNSQTCHTKVRDGEFQQKNGKLNKKSSKNSRSGIQLLPSRSRRIFDKLWIVGKVQENKSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1250 620 MobiDBLite consensus disorder prediction 584 608 - -
Aed6g1250 620 CDD BTB_POZ_NPY3-like 21 124 - -
Aed6g1250 620 Pfam BTB/POZ domain 26 117 IPR000210 GO:0005515
Aed6g1250 620 PANTHER OS12G0117600 PROTEIN 4 608 IPR043454 -
Aed6g1250 620 MobiDBLite consensus disorder prediction 584 620 - -
Aed6g1250 620 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Aed6g1250 620 Pfam NPH3 family 211 466 IPR027356 -
Aed6g1250 620 Gene3D Potassium Channel Kv1.1; Chain A 5 119 IPR011333 -
Aed6g1250 620 ProSiteProfiles NPH3 domain profile. 211 490 IPR027356 -
Aed6g1250 620 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 608 IPR029961 GO:0060918|GO:0099402
Aed6g1250 620 SUPERFAMILY POZ domain 22 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1250 Aed-Chr6 17300031 17305778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1250 22 489 EF-hand Containing Proteins AT3G44820 34.343 4.39e-91 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1250 - - gmx:100809437 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1250 6 17300031 17305778 Aed6g1250 6 17300031 17305778 ECH
Aed6g1250 6 17300031 17305778 Aed4g1730 4 21671748 21675663 PCT