Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1730 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATTCTCTTCAAGCTGATGGAAACTCTATCAGGTATGTCTCATCTGAATTGGCTACAGATGTTACCGTTAATGTTGGTGATGTTAAGTTTTACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAACCGACTACAGAAATTGGTATCAAAAGCTAATGAAGAGAATTCTGATGATATTTACTTGGACGATTTCCCTGGAGGGCCAAAGGCTTTTGAAATATGTGCAAAATTCTGTTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGTTGTGCAGCTGAGTACCTTGAGATGACTGAGGATGTTGACAGAGGAAACCTGGTTTTAAAGATTGAGGTGTTTCTTAACTCAAGTATCTTCCGTCGGTGGAAGGATTCTATAATTGTTCTCCAAACTTCTAAATCACTTCTGCCATGGTCCGAGGATCTGAAGATCGTTGGAAGATGCATAGATTCCATAGCTTCTAAAACTAGTGTGGACCCAGCATACATCACTTGGTCTTACACTTATGATAGGAAATTAACTGAACCTGATAATATTGTTGAGGACAAGATGACATTTTTAGAGAAAATCGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTATACAAACGAGTAATGGTTGTTGTGAAATCAAAGGGAAGAATGGATGGTGTTGTTATTGGCGAGGCACTAAAAACCTATGCATTAAGATGGATACCTGATTCGGTTGATACATTGGTTTCTAATGCAAACACCTCAAGGACCAAATCTGTGGTACAAACAATTGTCTGTTTACTGCCATACGATAGTGGCATTGGTTGTCCGTGTAGTTTCTTGCTGAAGCTATTGAGAGTGGCCATATTAGTTGGAGCAAATGAGTCATCAATAGAGGAATTGATGAAGAGCATTAGCCTCAAATTGCATGAGGCTTGTGTCAAAGATTTACTGATTCCAGCAAGGTCTCCCCAGATTACCACATATGATGTTCATTTGGTACAAGGTATTTTGAATCAATATATGAATCACGAAAAGGGAAGCTGTGGTATGGAGGTTGTAGAGGAGAAACATGGAGGAGAAGATACATATATTTTAGCACGTAGGTCTTTATTGCATGTTGGCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACATGATCCTAATCTTGGTCTCTCTAGTTTTGTTGATTTGTCACAATCCATTCCAGGTTTTGCTAGACCAGATCATGATGGTCTATACAAAGCTATAGACATCTACTTGAAGGCACACCCGAATTTGACGAAAGCTGAAAGGAAGAAGCTATGTGGACTAATGGATGTCCGGAAATTGACAGCAGGTGCTTCTGTGCATGCTGCACAGAACGAACGCCTTCCTCTTCGAGTTGTAGTGCAGGTCCTCTTCTTTGATCAGGCCAGATCTTCTGTCAGTTTTCGAACACCTGGTAACAATAGTGCACGTGACCCTTTATGCTCTCCAATGAAGCAAGATGAAGGATGTGAGACACCAGCGCGAGATAGCATTAGCTGCCAACCCCTCAAGAATCAGATGAGTCATTTGAGGATCAAGGATGAAGAGTTGCACAAAAATAGGAAGTTGTGTAAGAAGAATAGCAAAGCCAGCAAAAGTGGCATTCAGTTGCTGCCATCACGGTCGAGGAGAATCTTTGACAAGTTATGGAGTTTGAGAAAATGGCAAGGAGAGAATAGGAGCTCAGAGACTTCAGGGAGTTCTAGTAGCCCAACAACTACTTTAGGCCAGGGAGATACCAAATCATATGGCCGACACCAGAGGCATTCTATTTCTTAG 1854 0.4126 MKFMKLGSKPDSLQADGNSIRYVSSELATDVTVNVGDVKFYLHKFPLLSKSNRLQKLVSKANEENSDDIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDVDRGNLVLKIEVFLNSSIFRRWKDSIIVLQTSKSLLPWSEDLKIVGRCIDSIASKTSVDPAYITWSYTYDRKLTEPDNIVEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVMVVVKSKGRMDGVVIGEALKTYALRWIPDSVDTLVSNANTSRTKSVVQTIVCLLPYDSGIGCPCSFLLKLLRVAILVGANESSIEELMKSISLKLHEACVKDLLIPARSPQITTYDVHLVQGILNQYMNHEKGSCGMEVVEEKHGGEDTYILARRSLLHVGKLVDGYLGEIAHDPNLGLSSFVDLSQSIPGFARPDHDGLYKAIDIYLKAHPNLTKAERKKLCGLMDVRKLTAGASVHAAQNERLPLRVVVQVLFFDQARSSVSFRTPGNNSARDPLCSPMKQDEGCETPARDSISCQPLKNQMSHLRIKDEELHKNRKLCKKNSKASKSGIQLLPSRSRRIFDKLWSLRKWQGENRSSETSGSSSSPTTTLGQGDTKSYGRHQRHSIS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1730 617 Gene3D Potassium Channel Kv1.1; Chain A 3 125 IPR011333 -
Aed4g1730 617 SUPERFAMILY POZ domain 22 116 IPR011333 -
Aed4g1730 617 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Aed4g1730 617 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Aed4g1730 617 MobiDBLite consensus disorder prediction 493 521 - -
Aed4g1730 617 Pfam BTB/POZ domain 25 115 IPR000210 GO:0005515
Aed4g1730 617 MobiDBLite consensus disorder prediction 581 617 - -
Aed4g1730 617 PANTHER OS12G0117600 PROTEIN 4 605 IPR043454 -
Aed4g1730 617 CDD BTB_POZ_NPY3-like 21 124 - -
Aed4g1730 617 SMART BTB_4 29 127 IPR000210 GO:0005515
Aed4g1730 617 Pfam NPH3 family 211 463 IPR027356 -
Aed4g1730 617 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 605 IPR029961 GO:0060918|GO:0099402
Aed4g1730 617 MobiDBLite consensus disorder prediction 581 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1730 Aed-Chr4 21671748 21675663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1730 8 486 EF-hand Containing Proteins AT3G44820 33.399 8.64e-91 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1730 - - gmx:100784205 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1730 4 21671748 21675663 Aed4g1730 4 21671748 21675663 ECH
Aed6g1250 6 17300031 17305778 Aed4g1730 4 21671748 21675663 PCT