Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1157 ATGGCTAATTCCAACAAGGTTATTGCCACCATCATGGTGCTTTCTCTCCTTTCATACACAACAATATTCACCAATGCATGTGGCACATGCCACCCTAAACCTACCCCTTCTCCACCACCTCCTCCAGCAGGAAAGTGCCCTAAGGACACATTGAAGCTAGGGGTGTGTGCTGATGTTCTAGGTCTTGTTAATGTTGTTGTTGGTTCCCCTGTCTCTGCCAAGTGCTGTGCTTTGCTTGATGGTTTGGCTGATTTGGAAGCTGCACTTTGCCTCTGCACTGCTATTAAGGCCAATGTGCTTGGAATCAACTTGAATGTCCCCATCTCACTCAGTGTGCTCCTCAGTGCTTGCCAGAAAACTGTTCCTTCTGGCTTCCAATGTGCATAG 387 0.478 MANSNKVIATIMVLSLLSYTTIFTNACGTCHPKPTPSPPPPPAGKCPKDTLKLGVCADVLGLVNVVVGSPVSAKCCALLDGLADLEAALCLCTAIKANVLGINLNVPISLSVLLSACQKTVPSGFQCA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1157 128 PANTHER LIPID TRANSFER PROTEIN 29 128 - -
Aed6g1157 128 SMART aai_6 46 127 IPR016140 -
Aed6g1157 128 PANTHER - 29 128 - -
Aed6g1157 128 CDD HPS_like 44 127 IPR027923 -
Aed6g1157 128 Pfam Hydrophobic seed protein 46 128 IPR027923 -
Aed6g1157 128 Gene3D - 43 128 IPR036312 -
Aed6g1157 128 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 49 127 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1157 Aed-Chr6 16281201 16281587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1157 44 127 Acyl Lipid Metabolism Gene Families AT4G22490 38.095 8.34e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1157 - - gmx:100306307 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1157 6 16281201 16281587 Aed6g1157 6 16281201 16281587 ECH
Aed6g1157 6 16281201 16281587 Aed4g1781 4 22106078 22106596 PCT