Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1149 ATGCGTTCTTGCTCTCAACAACAACAACAACAATCACACACCGCAGTCTTCGTTCTTTTCTTCTTCGTTCTCCTTTTTGCTCTCGTTCGAGGGTTCTTTCGTGGGGAACACTGCAGATTTCACCACACGTACCAATGTCCAAAGTTCTCGGCTTTTCTGGGAAAAAAAGTTCATGGGTTGACCTTGGTTTTTGTTTATTTTTTCTGGGTCATGGATGATCATGTGGGTAGTAAAGGAGTTGACGATTTTTGCCCTATGGGATCATTATACGCCAACCCCAAGGAAGCAAGCTTCTACTTGCCCCTTGGTCCCCAAGTTGATGTGTACTTTCCTCCTCGGAAGAGATCGCGTGTCAACGTTCCATTCGTTTTCGATGGAGAATGGTTTGAGCAAAAGCAGAAAACCTCTATTGAATCCTTGCCAGATGAGTGTCTCTTTGAGATCTTTAGAAGGTTGCCTGTTGGTGAAGAGAGGAGTGCATGTGCCTGCGTTTCCAAGCGCTGGCTTATGCTTCTAAGCAGTATTTGCAAAACCGAAATCTGTTCCCGTGTAGAGAACCTTGAAAAGGAGGGTGATGATGTGGAATTCGGAGGTGAGGGATACCTCTCTCGCAGCTTGGAAGGAAGGAAGGCAACTGATGTTAGACTGGCTGCCATAGCTGTCGGGACTTCTTCTCGTGGAGGATTGGGAAAGCTCTCAATCCGCGGAAGCAACATGGTCCGTGGGGTGACTAGTCTTGGTCTCAAGGCTGTTGCTCATGGATGCCCTTCTTTGAAGTCTCTTTCTCTATGGAACGTTGCTACCATTGGTGACGAGGGCCTAATTGAGATTGCTAATGGATGCCACCAGCTAGAGAAGCTTGACCTTTGCAAGTGCCCTGCAATTACTGACAAGGCTTTGGTTGCAATTGCAAAGAACTGCCAGAATCTGACTGAGTTGTCCTTGGAATCTTGCCCTGGCATTGGTAATGAAGGTCTGCGAGCTATTGGGAAGTTATGCCCCAATCTAAGGTCTGTATCCATCAAGGACTGCACTGGTGTTAGCGATCAGGGAATTGCAGGATTGTTCTCTTCAACTTCTTTGGTGCTAACAAAGGTGAAGCTCCAGGCACTGAATGTTTCAGATCTCTCTCTAGCTGTTATCGGACATTATGGCAAGTCGGTTACCGATCTTGTCCTTAATTGCCTCCCAAATGTCAGCGAGAGGGGGTTCTGGGTCATGGGTAACGGTAATGGATTGCAGAAGCTGAAATCACTCACAGTTGCATCTTGCAGAGGAGTAACAAATATTGGCCTTGAAGCTGTAGGAAAGGGTTGTCCAAATCTGAAAATTGCACACCTTCACAAGTGTGCCTTTCTGTCAGACAATGGCTTGATATCATTTGCAAAGGCTGCTTCATCACTCGAGAGCCTACGATTGGAAGAGTGCCACAGAATTACCCAAGTTGGGTTATTTGGTGTCCTTTTTAACTGTGGTGCAAAATTGAAGTCCGTTTCTTTGGTGAGCTGCTATGGGATCAAAGACCTGAACTTGGTCTTGCCAGCAGTATCTCCATGTGAATCACTGCGGTCTTTATCTATCTGCAACTGCCCTGGATTTGGCAATGCCTCCCTGTCTGTATTGGGAAAGCTTTGCCCTCAGCTTCAGCATGTTGAATTAAGTGGACTCGAGGGAGTGACTGATGCAGGGCTTCTTCCACTCCTTGAGAGTTCCGAGGCTGGTTTGGTTAAAGTGAACCTTAGTGGTTGCACAAACATTACCGACAAAGTAGTTTCATCCTTGGCCAATCTTCATGGTTGGACTCTTGCGAATCTAAACCTTGATGGTTGTAGAAACGTCAGCGATGCTAGCTTGGTAGCAATTGCGGAAAACTGTGCATTGCTATGTGATCTTGATGTCTCCAAGTGCGCTATCACCGATGCTGGGATTGCAGCCCTGGCACATGCCAAACAGATTAATCTGCAAATTCTTTCTTTGTCAGGTTGCACTTTGGTCTCAGACAGGAGCATGCCCGCTTTGAGAAAATTGGGCCAAACCCTTTTGGGACTAAACATCCAACACTGCAGAGCAATCAACAGCAGCACAGTTGACACACTTGTGGAGCTTCTCTGGAGGTGTGACATCCTCTCCTGA 2133 0.4679 MRSCSQQQQQQSHTAVFVLFFFVLLFALVRGFFRGEHCRFHHTYQCPKFSAFLGKKVHGLTLVFVYFFWVMDDHVGSKGVDDFCPMGSLYANPKEASFYLPLGPQVDVYFPPRKRSRVNVPFVFDGEWFEQKQKTSIESLPDECLFEIFRRLPVGEERSACACVSKRWLMLLSSICKTEICSRVENLEKEGDDVEFGGEGYLSRSLEGRKATDVRLAAIAVGTSSRGGLGKLSIRGSNMVRGVTSLGLKAVAHGCPSLKSLSLWNVATIGDEGLIEIANGCHQLEKLDLCKCPAITDKALVAIAKNCQNLTELSLESCPGIGNEGLRAIGKLCPNLRSVSIKDCTGVSDQGIAGLFSSTSLVLTKVKLQALNVSDLSLAVIGHYGKSVTDLVLNCLPNVSERGFWVMGNGNGLQKLKSLTVASCRGVTNIGLEAVGKGCPNLKIAHLHKCAFLSDNGLISFAKAASSLESLRLEECHRITQVGLFGVLFNCGAKLKSVSLVSCYGIKDLNLVLPAVSPCESLRSLSICNCPGFGNASLSVLGKLCPQLQHVELSGLEGVTDAGLLPLLESSEAGLVKVNLSGCTNITDKVVSSLANLHGWTLANLNLDGCRNVSDASLVAIAENCALLCDLDVSKCAITDAGIAALAHAKQINLQILSLSGCTLVSDRSMPALRKLGQTLLGLNIQHCRAINSSTVDTLVELLWRCDILS 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1149 710 Pfam Leucine Rich repeat 306 329 IPR001611 GO:0005515
Aed6g1149 710 Pfam Leucine Rich repeat 631 647 IPR001611 GO:0005515
Aed6g1149 710 Gene3D Ribonuclease Inhibitor 309 511 IPR032675 -
Aed6g1149 710 Gene3D Ribonuclease Inhibitor 224 308 IPR032675 -
Aed6g1149 710 SUPERFAMILY RNI-like 248 361 - -
Aed6g1149 710 PANTHER UNCHARACTERIZED 85 700 - -
Aed6g1149 710 PANTHER UNCHARACTERIZED 87 701 - -
Aed6g1149 710 SMART fbox_2 140 181 IPR001810 GO:0005515
Aed6g1149 710 Gene3D - 130 179 - -
Aed6g1149 710 SUPERFAMILY F-box domain 133 174 IPR036047 GO:0005515
Aed6g1149 710 PANTHER EIN3-BINDING F-BOX PROTEIN 1 87 701 - -
Aed6g1149 710 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 85 700 - -
Aed6g1149 710 Pfam F-box domain 138 176 IPR001810 GO:0005515
Aed6g1149 710 SUPERFAMILY RNI-like 374 706 - -
Aed6g1149 710 Gene3D Ribonuclease Inhibitor 512 571 IPR032675 -
Aed6g1149 710 Gene3D Ribonuclease Inhibitor 572 632 IPR032675 -
Aed6g1149 710 Gene3D Ribonuclease Inhibitor 633 708 IPR032675 -
Aed6g1149 710 SMART LRR_CC_2 333 358 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 572 597 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 255 280 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 545 570 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 281 306 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 465 490 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 439 464 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 413 438 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 625 649 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 599 624 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 519 544 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 651 676 IPR006553 -
Aed6g1149 710 SMART LRR_CC_2 307 332 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1149 Aed-Chr6 16180773 16184416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1149 K14515 - gmx:100820247 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1149 6 16180773 16184416 Aed6g1149 6 16180773 16184416 ECH
Aed6g1149 6 16180773 16184416 Aed4g1795 4 22208553 22212085 PCT