Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1795 GGTTTCCACCCTCTCTTCCTCTCATGCATTTTTGCTCTCACGAGTTCTTATTCGCCGTTGCCCTCTTCTTCTTCGCTGTATTTCGAGCCTTCTTTTGTGTGGAACAGAGCAGATTTCACCCCCCGGGGAAATGATGATTTTTACCCTGCGGGTCCTATATATCCTAACCCCAAGGAACCGTGTCTCTTCTTGTCTCTTGGCCGTCAAGTTGATGTTTACCTTCCTGTTCAGAAGAGGTCTCGCATCAGTGTTCCATTTGATATCAGTGGAGGATGGTTTGAGCAGAAGCAGAAGCCAAAGACATCTATTGCATCTTTGCCAGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGCAGGCCAAGATAGGAGTCTCTGTGCTTCTGTATCCAAGCGCTGGCTTATGCTTCTGAGCAGTATCTCTAAGAATGAAATCTGCAGCAACGGAAGTACTGGAAATGTAAATGAAGGTGATGATAAGGAAATTAGTGACGAAGGATACCTATCCCGAAGCTTGGAGGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCTGTTGGGACAGCATCTCGAGGAGGGTTGGGGAAGCTTACTATTCGTGGATGCAATTCAGATCGTGGGGTGACTAATGTTGGTCTCAAGGCAATTGCTCATGGGTGCCCTTCTCTAAAGGTTTGCTCTTTATTCGATGTTTCTACTGTTGATGATGAAGGCCTGATTGAGATTGCTAGCGGGTGTCATCAGTTGGAGAAGCTTGACCTTTTCAAGTGTCCTAATATTTCTGACAAGACTTTAATTGCAGTTGCAAAGAACTGTCCCAAACTGACTGAGTTATCAATAGAGTCATGTCCTAACATTGGTAATGAAGGTCTACAAGCTATTGGGAAGTGTCCCAATCTAAGGTCTATCTCAATCAAGGATTGCTCTGGAGTTGGTGATCAGGGAGTTGCTGGCCTCTTGTCTTCAGCTGCTTTTGTCCTAAAAAAGGTGAAACTTGAGTCACTGAATGTTTCTGATCTCTCTCTAGCAGTGATTGGGCATTATGGTGTTGCAGTTACCAATCTTGTCCTAAGTTGCCTCCCAAATCTCAGCGAGAAAGGGTTCTGGGTTATGGGTAATGGCCGTGGACTGCAGAAATTAACTTCAATCACAATTGATTGCTGCCAAGGAGTAACAGATGTTGGTCTTGAAGCTATTGGAAAGGGTTGCCCAAATGTGCACAACATCCAGCTGCGCAAGTGTGCTTTTCTGTCAGACAAGGGATTGGTATCATTTGCCAGGGCTGCTCCATCAATTCAGAGCCTACAATTGCAAGAGTGCCACAGAATTACCCAAATTGGGCTCTTTGGTGTCTTTTTTACCTGTGGTGCAAAATTGAAGGTTCTTACTCTGATTAGCTGCTATGGAATCAAAGATCTCAACATTGAATTGCCAGGAATATCTCCTTCTGAATCAATTTGGTCATTAACAATCCGTGACTGCCCTGGATTTGGCAATGCTAACGTTGCTTTACTTGGAAAGCTGTGTCCTCGGCTTCAGCATGTTGAATTGAATGGACTTCGGGGGGTAACAGATGCAGGGTTTCTTCCACTTCTGGAGAGCTCTGAGGCTGGTCTGGTTAAAGTTAATCTAAGTGGTTGTGTAAATCTGTCGGACAGAGTAGTTTTGTCCATGGTCAACTCACATGGATGGACTATTGAGGTGCTAAGCCTTGATGGTTGTAAAAGAGTTGGCGATGCTAGCATGATGGCAATTGCAGGCAGTTGCCCATTGCTCGCTGATCTCGATGTTTCCAGGTGTGCAATCACTGATGCTGGTATCGCAGCCCTTGCTTGTGGAAAGCCGTTCAACCTGGAGGTACTTTCTATGGCAGGTTGCACATTGGTTTCTGACAAGAGTGTGCCTGCATTGAAAAAATTGGGCGATTCCCTTGCTGGATTAAATATTAAGCGTTGCAATGCAATCAGCAGCCGCTCTGTCGACAAGCTTGTGGAACATCTCTGCATGTGTGACATCCTCTACTGA 2031 0.4535 GFHPLFLSCIFALTSSYSPLPSSSSLYFEPSFVWNRADFTPRGNDDFYPAGPIYPNPKEPCLFLSLGRQVDVYLPVQKRSRISVPFDISGGWFEQKQKPKTSIASLPDECLFEILRRLPAGQDRSLCASVSKRWLMLLSSISKNEICSNGSTGNVNEGDDKEISDEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLTIRGCNSDRGVTNVGLKAIAHGCPSLKVCSLFDVSTVDDEGLIEIASGCHQLEKLDLFKCPNISDKTLIAVAKNCPKLTELSIESCPNIGNEGLQAIGKCPNLRSISIKDCSGVGDQGVAGLLSSAAFVLKKVKLESLNVSDLSLAVIGHYGVAVTNLVLSCLPNLSEKGFWVMGNGRGLQKLTSITIDCCQGVTDVGLEAIGKGCPNVHNIQLRKCAFLSDKGLVSFARAAPSIQSLQLQECHRITQIGLFGVFFTCGAKLKVLTLISCYGIKDLNIELPGISPSESIWSLTIRDCPGFGNANVALLGKLCPRLQHVELNGLRGVTDAGFLPLLESSEAGLVKVNLSGCVNLSDRVVLSMVNSHGWTIEVLSLDGCKRVGDASMMAIAGSCPLLADLDVSRCAITDAGIAALACGKPFNLEVLSMAGCTLVSDKSVPALKKLGDSLAGLNIKRCNAISSRSVDKLVEHLCMCDILY 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1795 676 SUPERFAMILY F-box domain 99 140 IPR036047 GO:0005515
Aed4g1795 676 Pfam Leucine Rich repeat 273 296 IPR001611 GO:0005515
Aed4g1795 676 Pfam Leucine Rich repeat 591 613 IPR001611 GO:0005515
Aed4g1795 676 Pfam Leucine Rich repeat 380 401 IPR001611 GO:0005515
Aed4g1795 676 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 49 667 - -
Aed4g1795 676 Gene3D - 95 144 - -
Aed4g1795 676 Gene3D Ribonuclease Inhibitor 287 484 IPR032675 -
Aed4g1795 676 SUPERFAMILY RNI-like 459 665 - -
Aed4g1795 676 SMART LRR_CC_2 300 324 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 617 642 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 565 590 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 431 456 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 405 430 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 511 536 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 538 563 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 222 247 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 591 615 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 379 404 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 248 273 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 274 299 IPR006553 -
Aed4g1795 676 SMART LRR_CC_2 643 668 IPR006553 -
Aed4g1795 676 Gene3D Ribonuclease Inhibitor 616 674 IPR032675 -
Aed4g1795 676 SMART fbox_2 106 147 IPR001810 GO:0005515
Aed4g1795 676 Pfam F-box domain 104 142 IPR001810 GO:0005515
Aed4g1795 676 PANTHER UNCHARACTERIZED 49 667 - -
Aed4g1795 676 Gene3D Ribonuclease Inhibitor 171 274 IPR032675 -
Aed4g1795 676 Gene3D Ribonuclease Inhibitor 485 614 IPR032675 -
Aed4g1795 676 SUPERFAMILY RNI-like 213 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1795 Aed-Chr4 22208553 22212085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1795 K14515 - gmx:100805418 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1795 4 22208553 22212085 Aed4g1795 4 22208553 22212085 ECH
Aed6g1149 6 16180773 16184416 Aed4g1795 4 22208553 22212085 PCT