Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1117 ATGGGTTCCTCCTCTAGCCAACAAGACCAAGAAGAAAAAAAACAAGAGTCCAGGACTCTTGTTCACGTGGAAGGACCTATCATCATAGGTGCCGGCCCTTCGGGGCTAGCCGTCGCAGCGTGTCTCTCGAAACACGAAGTTTCCTTCGTGATCCTTGAGAGGCACGACTGCATAGCCTCGCTGTGGCAAAACAAAACCTACGACCGCCTCAAACTCCACCTCCCGAAACAATTCTGCGAGCTCCCCCTAAAGGGCTTCCCCGACACATTCCCAAAATACCCCTCAAAGCACCAGTTCATCTCCTACATGGAGTCCTACGCCGCACACTTCAAAATCGAACCAATCTTCAACCAGTCCGTGAAAAGTGCCGAGTTTGACCCCAATGGGTCGAAGCTTTGGGTGGTTAGAACCGAAGAAGGGTTTGAATACTCTTCTCGGTGGCTTGTGGTTGCCACTGGCGAAAATGCTGAGCCTGTAGTTCCTAGGATTCATGGGTTGGAGCTTTTTCATGGCCCCGTGGCTCATACCAGTGTTTACAAGTCTGGCTCTGAGTTTAGGAACAAGAAGGTTCTTGTCATTGGGTGTGGCAATTCGGGCATGGAAGTTTGCTTGGATCTTTGTAGACACAATGCTTCACCTTTCATGGTTGCTAGAAACACAGTACATGTGCTACCTAGGGAGATGTTTGGTTTCTCAACATTTGGGGTAGCCATGGCTCTCTACAAGTGGTTTCCCATTAAGATAGTAGACAAGATCATCTTGCTTGCAACAAACATCATATTGGGAAACACCAATCACTACGGAATCAAGAGGCCCAAAACCGGCCCAATAGAGCTCAAACTCGCCACAGGGAAAACCCCGGTTCTTGATGTTGGTCAAGTCGCACAAATCAAATGTGGCAACATTAAGGTGATGGAGGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTATGGATGGAGGACAAGAAAGGGAATTCGATGCTATAATCTTGGCAACAGGATACAAGAGCAACGTGCCTACTTGGCTCAAGGGATGTGATTTTTTCACGGAAGATGGAATGCCGAAAACGCCCTTTCCTCATGGGTGGAAAGGAGAGCAGGGATTATATACGGTGGGGTTCACAAGAAGAGGTCTACAAGGAACGTCGTGTGATGCAATCAATATCGCTCAAGACATCGCTGAACAGTGGAGAACCGTAGAGGATAATAGCCACTGCGATTCACACATCATCCTACTCAATAATAATTCTTCGTAG 1260 0.477 MGSSSSQQDQEEKKQESRTLVHVEGPIIIGAGPSGLAVAACLSKHEVSFVILERHDCIASLWQNKTYDRLKLHLPKQFCELPLKGFPDTFPKYPSKHQFISYMESYAAHFKIEPIFNQSVKSAEFDPNGSKLWVVRTEEGFEYSSRWLVVATGENAEPVVPRIHGLELFHGPVAHTSVYKSGSEFRNKKVLVIGCGNSGMEVCLDLCRHNASPFMVARNTVHVLPREMFGFSTFGVAMALYKWFPIKIVDKIILLATNIILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKCGNIKVMEGVKEITRNGAKFMDGGQEREFDAIILATGYKSNVPTWLKGCDFFTEDGMPKTPFPHGWKGEQGLYTVGFTRRGLQGTSCDAINIAQDIAEQWRTVEDNSHCDSHIILLNNNSS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1117 419 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 16 405 - -
Aed6g1117 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 26 45 - -
Aed6g1117 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 189 207 - -
Aed6g1117 419 SUPERFAMILY FAD/NAD(P)-binding domain 188 399 IPR036188 -
Aed6g1117 419 Pfam Flavin-binding monooxygenase-like 28 341 IPR020946 GO:0004499|GO:0050660|GO:0050661
Aed6g1117 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 185 209 - -
Aed6g1117 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 146 154 - -
Aed6g1117 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 25 47 - -
Aed6g1117 419 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 16 405 - -
Aed6g1117 419 SUPERFAMILY FAD/NAD(P)-binding domain 27 221 IPR036188 -
Aed6g1117 419 Gene3D - 26 404 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1117 Aed-Chr6 15770747 15773171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1117 K11816 - gmx:100798781 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1117 6 15770747 15773171 Aed4g1827 4 22484089 22486078 PCT