Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1827 GTACGACTGCGAGAAACACAAGAGAAGCGAAACAAAGAGACATATATAGAAAAAAGAAAAGCAAAGAAACAGGGTTCTTCAATCCTCCTTTTCCTTGGTTACGTACACATGGAGGGTTTGGAAGAAGTAAAGTGCGTTTGGGTTTACGGGCCAATCATCGTAGGAGCAGGGCCCTCAGGGCTTGCCGTTGCGGCGTGTCTCTCCCGCCACGGAGTGCCCTACGTCATTCTCGAGAGGAGTGACTGCGTAACCTCTCTTTGGCAACACAGAACCTACGACCGCCTCAAACTCCACCTCCCCAAACACTTCTGCCAACTCCCCCTCATGCCCTTCCCTGACAATTTCCCAAAATACCCCTCCAAGAACCAGTTCATCTCCTACCTCAACTCCTACGCTTCACGCTTCGACATCCGCCCCAGGTTCAACCAATCCGTCCAGACCGCCCACTTCGACCCTACATATCAACTTTGGGTGGTCAGAACCAACGGTTTTCAGTACATTTCCCCGTGGCTCGTGGTTGCTACCGGAGAGAATGCCGAGCCTGTTATTCCTTCCATTTCTGGCATGGACAAGTTTCACGGACCCATTGTTCACACCAGCGTCTATAAATCTGGCTCTCAGTACCAAAACCAGAGGGTCCTCATCATTGGTTGCGGCAACTCCGGTATGGAAGTTAGCTTGGACCTTTGCCGCCACCACGCCAACCCTTACATGGTTGCAAGAAATACAGTACATGTTCTGCCTAGGGAGATGTTTGGGTTTTCGACGTTTGGAATAGCTATGGGCCTCTTGAAATGGCTTCCAGTAAAGTTAGTAGACAAGTTGGTTTTGGCGGCGGCTTGGTTGACGTTGGGTGACACCGCTCGCTATGGTGTTAGGAGGCCCAAAACGGGGCCGATAGAGCTCAAACTTGTAACCGGGAAGACCCCTGTGCTTGATGTTGGACAAGTCCGCCAAATGAGATCCGGTAACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAACGGTGCCAAGTTTATGGATGGACAAGAAAAGGAGTTCAGCGCTATAATATTGGCAACGGGATACAAAAGCAACGTGCCCACTTGGCTTAAGAGCTGTGAATCTTTCACCAAAGACGGAATGCCGAAAACGCCGTTTCCAATGGGTTGGAAGGGAGAGAACGGATTGTATACAGTGGGGTTCACGAGAAGAGGACTTCTAGGAACTGCATCAGACGCCGTCCAAATTGCTAAAGACATCGCTGAATCTGATCTATGGATGACCGTTAAGGACAAATCATACTGTAATTCCCACATCATCTTGCTCAAGAGCAGTACATAG 1329 0.4951 VRLRETQEKRNKETYIEKRKAKKQGSSILLFLGYVHMEGLEEVKCVWVYGPIIVGAGPSGLAVAACLSRHGVPYVILERSDCVTSLWQHRTYDRLKLHLPKHFCQLPLMPFPDNFPKYPSKNQFISYLNSYASRFDIRPRFNQSVQTAHFDPTYQLWVVRTNGFQYISPWLVVATGENAEPVIPSISGMDKFHGPIVHTSVYKSGSQYQNQRVLIIGCGNSGMEVSLDLCRHHANPYMVARNTVHVLPREMFGFSTFGIAMGLLKWLPVKLVDKLVLAAAWLTLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVRQMRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSCESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGTASDAVQIAKDIAESDLWMTVKDKSYCNSHIILLKSST 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1827 442 Gene3D - 49 421 IPR036188 -
Aed4g1827 442 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 41 437 - -
Aed4g1827 442 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 243 - -
Aed4g1827 442 SUPERFAMILY FAD/NAD(P)-binding domain 209 417 IPR036188 -
Aed4g1827 442 Coils Coil 4 24 - -
Aed4g1827 442 PRINTS Pyridine nucleotide disulphide reductase class-II signature 50 72 - -
Aed4g1827 442 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 177 - -
Aed4g1827 442 PRINTS Pyridine nucleotide disulphide reductase class-II signature 208 232 - -
Aed4g1827 442 PRINTS FAD-dependent pyridine nucleotide reductase signature 51 70 - -
Aed4g1827 442 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 230 - -
Aed4g1827 442 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 41 437 - -
Aed4g1827 442 SUPERFAMILY FAD/NAD(P)-binding domain 52 319 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1827 Aed-Chr4 22484089 22486078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1827 K11816 - gmx:100789347 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1117 6 15770747 15773171 Aed4g1827 4 22484089 22486078 PCT