Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1027 ATGTCGTCTTCTTTTCTTCCCGCCACAACAGAGTCACTCAATCTGGCAGTGGAGACCAAAGACCCGTCTGAGTCCATCTCCATTCTTTATCGCGTACTTGATGATCCTTCTTCTTCTCCAGATGCTCTGTGCATGAAAGAGAAGGCCATCACAAACCTCACCGAGCATCTCAGGGAACAGAATAGGGCGGAGGATCTGCGCGGCCTTCTTACTCAGTTGAGGCCCTTCTTTTCCTTGATTCCCAAGGCAAAGACTGCAAAGATTGTGAGGGGAATTATCGATACCGTTGCAAAAATACCAGGCACTTCTGATCTACAAATTTCACTCTGCAAGGAAATGGTGCAATGGACTCGTGCTGAAAAGCGTACCTTTCTGCGACAGCGAGTTGAGGCAAGACTTGCAGCACTTCTGATGGAAAATAAGGATTTTTCTGAAGCTTTGACTCTCCTCAGTGGCCTGGTCAAGGAGGTTAGAAGACTAGATGACAAGCTTCTCCTTGTAGACATAGACTTGCTTGAAAGCAAGCTGCACTTCTCCTTGAGAAACCTTCCGAAGGCGAAAGCCGCCCTCACAGCTGCAAGAACAGCTGCAAATACAATTTATGTTCCTCCGGCTCAACCAGGCGCCATAGATCTGCAGAGCGGGATTCTTCACGCCGAGGAAAAGGATTACAAAACTGCATACAGTTATATCTTTGAAGCTTTCGAGTCTTTCAATGCTCTCGAGGACCCCAAGGCTGTGTTTAGCCTGAAATACATGCTGTTGTGTAAGATCATGTCCGATGATGTGGCCGGAATTATATCTTCCAAAGCCGGCCTGCAGTATCTCGGGTCCGACTTGAATGCCATGAAAGCCGTTGCAGATGCGCATTCCAAGCGATCGCTGAAGTTATTCAAAACTGCTTTGCGAGATTTCAAGGCTCAATTGGAGGAAGACCCGATTGTCCACAGGCACCTATCGTCCCTAATATTTGCACACATTGCCCAACTAATCGAACTTCCCATCAATCACGTGGAGCAGAAACTGTCTCAGATGATTCTGGACAAGAAATTTGTCAGGACATTGGATCAAGGAACCGGATGTCTCGTCATATTTGATGATCCCAAAACTGATGCAATTTACTCAACAACCTTAGAAACCATTTCTAACATTGAAAAAGTTGTGGACAGTTTTTAG 1176 0.4617 MSSSFLPATTESLNLAVETKDPSESISILYRVLDDPSSSPDALCMKEKAITNLTEHLREQNRAEDLRGLLTQLRPFFSLIPKAKTAKIVRGIIDTVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRVEARLAALLMENKDFSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANTIYVPPAQPGAIDLQSGILHAEEKDYKTAYSYIFEAFESFNALEDPKAVFSLKYMLLCKIMSDDVAGIISSKAGLQYLGSDLNAMKAVADAHSKRSLKLFKTALRDFKAQLEEDPIVHRHLSSLIFAHIAQLIELPINHVEQKLSQMILDKKFVRTLDQGTGCLVIFDDPKTDAIYSTTLETISNIEKVVDSF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1027 391 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11-LIKE PROTEIN 2 390 - -
Aed6g1027 391 SUPERFAMILY TPR-like 129 316 IPR011990 GO:0005515
Aed6g1027 391 SUPERFAMILY "Winged helix" DNA-binding domain 319 374 IPR036390 -
Aed6g1027 391 Coils Coil 126 146 - -
Aed6g1027 391 Gene3D - 31 367 - -
Aed6g1027 391 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 2 390 - -
Aed6g1027 391 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 17 128 IPR040773 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1027 Aed-Chr6 14435458 14436660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1027 K03036 - gmx:100777365 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2364 7 25682953 25686976 Aed6g1027 6 14435458 14436660 PCT