Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1002 ATGCAACTTCAGGTGGCAGAATCGTTGATTCAAAAGTGGTCGGCAAAAGCAACGGCATCCGGGGGCGAGTCGCACCTCAGCGCACACGTGGCACCTTCTCATAAGCCCAATGCTATATTCCTCTTTCCTCCCCCTCAAACTTCCAATTCTAGCCCCATCTTTTTCCCTCAACAGCGGAATCCACCAAACACGCATCAAATTTTTCTTCGTTTTTTCTTTAGAGAGAGAAACAAGAGAGAGAAAGCGGTGTCGGAATCGTGTTATCCGATCGCACCGGCGGTTCGGTTTATGGTCGTCGGAGAATCGCCGATCTTGCTCACACCTCGAAAAAAAGCGTCGTCGTCGTCGGTGACCGGAGGAGATGGTGAATTCCATGGTGGAGCGCGCCACGAGCAGCATGCTCATAGGACCCGATTGGGCCATGAACATCGAGATCTGCGACATACTCAATCACGACCCTGGTTGCTGGAGACAATCATAAAGAACTGTGGAGATATTGTTCACATGCATGTTGCAGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATACTCATGTCAGGGATAAGATACTGGTTCTTATCAATACTTGGCAAGAAGCTTTTGGAGGCCCGAGGGCAAGATATCCACAATATTATGCTGCTTACCAGGAACTGTTGCGTGTTGGTGCAGTATTCCCTCAGAGGTCTGAACAATCTGCACCTGTATTGACACCTCCACAAACACAGCCACTGGCATCATACCCTCAAAATATACGCAACTCAGATGCTCCCCAGGACACAGCTGAGTCCTCTGCAGAGTCCGAGTTTCCAACGCTAAATTTGACCGAAATTCAGAATGCACGTGGCATCATGGATGTTCTTGCAGAAATGCTCAATGCCTTAGACCCTAGTAACAAAGAAGGGCTTAGGCAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTCGAACTTACAAGCAGAGAGTGGTACACCTTGTCAACTCAACTTCGGATGAATCACTCCTATGCCAAGGACTAGCCCTGAATGATGATCTGCAGCGTGTACTGGCCAAACATGAATCTATTTCTTCAGGAAATTCTACCAAAAACGAAAATCACACAGAGAATTCAAAACCTGCATCTGTCAGAGCTCTTGTAGATATTGATGCTCCTTTGGTTGATACTGGAGATACTAGCAAACAAACTGATGGGAGATCCCCTTCTAATGTTGACGCAGGGTCCCAAACATTTAATCAGTTACTGCTTACTGCGCCTCCAAATTCTAATGGTTCAACAATTCCTGCCAAGGTTGATCCCAAATGGGACCTGCTCAGTGGCGATGACTTTAACTCACCAAAAGCAGATTCTTCAAATGCTCTTGTTCCTGTAGGAGAAAAACCATCTGCCAGTCCTGTTAATCAGCAGAATGCCGTTGTTCTTTTTGATATGTTTTCTGATGGAAATAATGCAACTACATCTGTCAATTCCCAGCCACCCCAGCCAGCTAATGTTGCTGGCCAAACCAGTCCGTATGCTCCCCAATTTCAACAGCAGCAAACAGTCACATCTCAAGGTGGATTTTACCCCAATGGAAATGCCCCAAATGCAGGTTCACCTCACTATGAGCAATCACTGTATACGCAAAGTACAGGTCCTGCCTGGAATGGTCAGGTTGCACAACAGCAACAGCCACCTTCGCTCGCTTATGGTGCACAAGGAAGTGGATCATTGCCACCACCTCCCTGGGAAGCTCAACCAGCAGATAACGGAAGTCCATTAGCGGGCAGCGCTCAGTATCCACACATGCAGAATGCTGGACATCCTCCGTTGCCACAAACAATGGGCAACGACCAGGGTGTTGGTATGTATATGCAGCAGCCAAATGCTCACAACCACATGTCAGGAATGAACAACAACCATGTTGAGAGCAATCAAATGGGCTTGCCACCTCAACATATGCAAGGTGTCGCAGGAGGACCCTACATGGGTATGGCTCCACACCAAATGCAGGGTGGTCATGTGATGTATCCTCAACAGATGTACGGAAACCAATATATGGGATATGGCGGCTATGATCATCAACAACAAGGAGTTCCGTATATTGAACGACAAATGTATGGTATGTCCGTAAGAGACGACAGTAGTTTGAGAAACCCTTACCAAGCTTCTTCTGCATCTTATGCTCCATCTGGTAAGCCTTCAAAGCCAGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAGCCCAAACCCACTCCAGGTCGAGCTGGTAGCATGTAA 2283 0.4704 MQLQVAESLIQKWSAKATASGGESHLSAHVAPSHKPNAIFLFPPPQTSNSSPIFFPQQRNPPNTHQIFLRFFFRERNKREKAVSESCYPIAPAVRFMVVGESPILLTPRKKASSSSVTGGDGEFHGGARHEQHAHRTRLGHEHRDLRHTQSRPWLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDTHVRDKILVLINTWQEAFGGPRARYPQYYAAYQELLRVGAVFPQRSEQSAPVLTPPQTQPLASYPQNIRNSDAPQDTAESSAESEFPTLNLTEIQNARGIMDVLAEMLNALDPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESISSGNSTKNENHTENSKPASVRALVDIDAPLVDTGDTSKQTDGRSPSNVDAGSQTFNQLLLTAPPNSNGSTIPAKVDPKWDLLSGDDFNSPKADSSNALVPVGEKPSASPVNQQNAVVLFDMFSDGNNATTSVNSQPPQPANVAGQTSPYAPQFQQQQTVTSQGGFYPNGNAPNAGSPHYEQSLYTQSTGPAWNGQVAQQQQPPSLAYGAQGSGSLPPPPWEAQPADNGSPLAGSAQYPHMQNAGHPPLPQTMGNDQGVGMYMQQPNAHNHMSGMNNNHVESNQMGLPPQHMQGVAGGPYMGMAPHQMQGGHVMYPQQMYGNQYMGYGGYDHQQQGVPYIERQMYGMSVRDDSSLRNPYQASSASYAPSGKPSKPEDKLFGDLVDMAKVKPKPTPGRAGSM 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1002 760 MobiDBLite consensus disorder prediction 393 411 - -
Aed6g1002 760 CDD GAT_GGA_like_plant 282 360 - -
Aed6g1002 760 SUPERFAMILY ENTH/VHS domain 155 232 IPR008942 -
Aed6g1002 760 MobiDBLite consensus disorder prediction 358 377 - -
Aed6g1002 760 ProSiteProfiles VHS domain profile. 127 232 IPR002014 GO:0035091|GO:0043130
Aed6g1002 760 CDD VHS 136 226 - -
Aed6g1002 760 MobiDBLite consensus disorder prediction 487 568 - -
Aed6g1002 760 SUPERFAMILY GAT-like domain 235 363 - -
Aed6g1002 760 MobiDBLite consensus disorder prediction 712 728 - -
Aed6g1002 760 MobiDBLite consensus disorder prediction 358 411 - -
Aed6g1002 760 Pfam VHS domain 155 217 IPR002014 GO:0035091|GO:0043130
Aed6g1002 760 MobiDBLite consensus disorder prediction 237 274 - -
Aed6g1002 760 Gene3D - 277 369 IPR038425 -
Aed6g1002 760 MobiDBLite consensus disorder prediction 711 760 - -
Aed6g1002 760 MobiDBLite consensus disorder prediction 444 470 - -
Aed6g1002 760 MobiDBLite consensus disorder prediction 487 601 - -
Aed6g1002 760 Gene3D - 125 241 IPR008942 -
Aed6g1002 760 PANTHER TARGET OF MYB PROTEIN 1 155 754 - -
Aed6g1002 760 SMART VHS_2 105 228 IPR002014 GO:0035091|GO:0043130
Aed6g1002 760 ProSiteProfiles GAT domain profile. 274 362 IPR004152 GO:0035091|GO:0043130
Aed6g1002 760 PANTHER TOM1-LIKE PROTEIN 155 754 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aed6g1002 760 Pfam GAT domain 288 362 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1002 Aed-Chr6 13679718 13688980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1002 - - gmx:100809022 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1002 6 13679718 13688980 Aed6g1002 6 13679718 13688980 ECH
Aed6g1002 6 13679718 13688980 Aed10g0373 10 3015657 3020702 PCT