Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0373 ATGGCTAACAACGCAGCTGCCTGTGCCGAGAGAGCAACTAGTGACATGCTCATTGGTCCGGATTGGGCAATCAACATAGAGTTGTGTGATATCATTAATATGGACCCGGGGCAAGCAAAGGATGCATTGAAGATACTCAAGAAGCGTTTGACCAGTAAAAATCCAAAAATACAGCTTCTGGCCCTTTTTGTGCTGGAGACCCTTAGTAAAAACTGTGGTGAAAGTGTATTTCAGCAGATCATCGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCGGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTAACACATGGCAAGAAGCTTTTGGGGGGCCAACTGGAGTTTATCCTCAATACTATGCAGCATATAATGAATTAAAGTCTGCTGGAGTTGAATTTCCACCACAAGAAGAGAATAGTGTACCATTCTTCACTCCTCCTCAAACTCAGCCAGTTATTCATTCTGCTGCAGAATATGATGATGCTACTATTCAGGCTTCTCTTGAGTCAGATGCATCTGATCTTAGGGATGAGCAGCTTTTAGGTCAGGGATTGACACTGAATGACAGCCTTCAGCGAGTACTCTGTCAACATGATGACATTGTGAAAGGAACTGCTGATTCAGGTGCTAGAGAAGCAGAAACTTCAATTCTGCCACTTGTAAATGTAAACCATGAAGATGATGAATCAGAGGACGATTTTGCTCAACTAGCCCCTAGGTCATCACGTGATACTCATGCACAGAATCGGAAACCAGCCTATGACAAGGCAGAACCAGGGAGGACAAACCCACTCATTCCCCCACCACCAGCATCAAAAAAGCCGGTCTACTCTGGCACTGGCATGGTTGACTATCTCAGTGGTGATACATATAAGTCAGAAGGATCTCCTGCAAACTCAGAACCCACTTCATTTGCAGCTCCCCTTCATTCTAGCCCAAATCCAACCTCATCACTATCTTCCTCTCGTCCTCATGCTGTGAGTACCTCATCACCAATTTTTAGCAGTCAGCCTGTGTATGATGAACAACCAACTTCTGTGGACAAATCTTCGGAGGAGCGTCTGCCTGCAGCTCCCTGGGACACTCAATCTTCTGGCATCATTCCGCCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTTGAGCAACAAGGTGGTGCATCTCATTCAAGTGGTGGATCCAGTTCCTCTAATGACAGCTTGGTGGGACAAACTCAAAATCTCTCCCTGAATTCATCCACCCCAACCAATCAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTTGTTGATTTTGCAAAATCCAAAACCTCATCATCTTCCAAACCCAATAGGTCATATTGA 1368 0.4415 MANNAAACAERATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLTSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILINTWQEAFGGPTGVYPQYYAAYNELKSAGVEFPPQEENSVPFFTPPQTQPVIHSAAEYDDATIQASLESDASDLRDEQLLGQGLTLNDSLQRVLCQHDDIVKGTADSGAREAETSILPLVNVNHEDDESEDDFAQLAPRSSRDTHAQNRKPAYDKAEPGRTNPLIPPPPASKKPVYSGTGMVDYLSGDTYKSEGSPANSEPTSFAAPLHSSPNPTSSLSSSRPHAVSTSSPIFSSQPVYDEQPTSVDKSSEERLPAAPWDTQSSGIIPPPPSKYNQRQQFFEQQGGASHSSGGSSSSNDSLVGQTQNLSLNSSTPTNQQKPEDALFKDLVDFAKSKTSSSSKPNRSY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0373 455 MobiDBLite consensus disorder prediction 231 433 - -
Aed10g0373 455 SUPERFAMILY ENTH/VHS domain 4 142 IPR008942 -
Aed10g0373 455 MobiDBLite consensus disorder prediction 241 264 - -
Aed10g0373 455 CDD VHS 10 135 - -
Aed10g0373 455 PIRSF TOM1 179 454 IPR014645 -
Aed10g0373 455 PIRSF TOM1 1 183 IPR014645 -
Aed10g0373 455 SUPERFAMILY GAT-like domain 176 212 - -
Aed10g0373 455 PANTHER TOM1-LIKE PROTEIN 4 182 454 - -
Aed10g0373 455 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Aed10g0373 455 PANTHER TOM1-LIKE PROTEIN 1 182 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aed10g0373 455 PANTHER TOM1-LIKE PROTEIN 4 1 182 - -
Aed10g0373 455 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Aed10g0373 455 Gene3D - 2 158 IPR008942 -
Aed10g0373 455 Pfam VHS domain 9 134 IPR002014 GO:0035091|GO:0043130
Aed10g0373 455 MobiDBLite consensus disorder prediction 299 352 - -
Aed10g0373 455 PANTHER TOM1-LIKE PROTEIN 182 454 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aed10g0373 455 MobiDBLite consensus disorder prediction 374 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0373 Aed-Chr10 3015657 3020702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0373 - - rcu:8270940 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0373 10 3015657 3020702 Aed10g0373 10 3015657 3020702 ECH
Aed6g1002 6 13679718 13688980 Aed10g0373 10 3015657 3020702 PCT