Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0645 ATGACTTCCACACTAATAATTGCTTTCAACAACATCAACAGTTTCCAAGAGGTTGTCCCCTTGAATGCTGGAAATGTTCTGGGGGCAGAGGATAACACACCAATCCGAAAATGGGAAGCAATCATCAGAAGAACTCTAAACAAATCATCTGAACCTGAAAGCAAGCACAAAAGCTATAGTGCCCCTACTTCTCCTGTTCTAAAAACCTCTGCTTCTTCTGCTAATGCTATATCAAACAGTGTAGATGTCAATCCACTAGAACAAGTGGAAGTGAAAAGCATAATTGGTATAAAAAAGAATTTACAATTGAGGAAAGTGCATGACATTGATCTTAAGAGTATACTTGACTGGCCTGAACGTCCATTAGATGCAACTCCACACACTGATTCCAGTCCAAAACTGCGTAGAGTACTAAGCAGCTCAGACAGAACAAATAATGCTTCAAAATATGGCGGTGCAATGAAAAGGTCACACCACAGTTCTGGAAACTTGGGCTTGTTATGGAAAGAGCAGAAAGTGATGCCTGAAGAAGTGATTGATGATGATGCTCTTGATGACTTATTATCCGACGAGCTATCAGACGAGGAGGAAGATGATGGTGATTTTTTTGAAGTGCCAAATGACAAAGAAGACAATGGAATCGGTCCGGTGAAACCTCATCGTAGGTATGTTCGCATTGTCAGCAAGCAGATGGTGGGAATATATGTGTCTGTTTGGGTGCAGAGGAGGTTGAGAAAGCACATTAATAACTTGAAAGTTTCTCCAGTTGGAGTAGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGTGTGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTGACTTCTGGTCAGAAGGATGGGGCAGAAACAAGAAGAAACTCAGATGTTCATGAAATTATTCGCCGCACTTGTTTCTCAACCGTCTTTGATTCAGATCAACCACAAACAATCCCATCTCATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAGTATGATGGATGAAGAGGTTCGAAAGCTGGTAGCTCTAAAGAAATGGAATGAACTGATGAATTATGATCAGCTAAGTAATGAATTGCGTAGTGGGCATGTGTTTGATGGATGGAAAGAGGGGTTGATTAACTTCCCACCCACTTACAAGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAGCAACTTCAATACAGGCGTGCAGAAAATAAGCTCTCAGATCATCGACCAGTTAGTTCAATATTCTTGATTGATGTTGAAGTATTTGACCAACACAAACTACATCGAGCTCTGACTTTCACAAATGCAGCAGTGCACCCTGAGATTTTCCTTAAAGAAGATGGAGACTGGTCATATTAG 1386 0.4076 MTSTLIIAFNNINSFQEVVPLNAGNVLGAEDNTPIRKWEAIIRRTLNKSSEPESKHKSYSAPTSPVLKTSASSANAISNSVDVNPLEQVEVKSIIGIKKNLQLRKVHDIDLKSILDWPERPLDATPHTDSSPKLRRVLSSSDRTNNASKYGGAMKRSHHSSGNLGLLWKEQKVMPEEVIDDDALDDLLSDELSDEEEDDGDFFEVPNDKEDNGIGPVKPHRRYVRIVSKQMVGIYVSVWVQRRLRKHINNLKVSPVGVGLMGYMGNKGSVSVSVSLFQSRLCFVCSHLTSGQKDGAETRRNSDVHEIIRRTCFSTVFDSDQPQTIPSHDQIFWFGDLNYRISMMDEEVRKLVALKKWNELMNYDQLSNELRSGHVFDGWKEGLINFPPTYKCDRILWLGKGIKQLQYRRAENKLSDHRPVSSIFLIDVEVFDQHKLHRALTFTNAAVHPEIFLKEDGDWSY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0645 461 MobiDBLite consensus disorder prediction 119 160 - -
Aed6g0645 461 SMART i5p_5 153 432 IPR000300 GO:0016791|GO:0046856
Aed6g0645 461 MobiDBLite consensus disorder prediction 47 67 - -
Aed6g0645 461 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 12 391 - -
Aed6g0645 461 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 392 455 - -
Aed6g0645 461 SUPERFAMILY DNase I-like 14 442 IPR036691 -
Aed6g0645 461 MobiDBLite consensus disorder prediction 132 151 - -
Aed6g0645 461 Gene3D Endonuclease/exonuclease/phosphatase 167 450 IPR036691 -
Aed6g0645 461 MobiDBLite consensus disorder prediction 194 216 - -
Aed6g0645 461 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 12 391 IPR045849 GO:0004445|GO:0046855
Aed6g0645 461 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 392 455 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0645 Aed-Chr6 5476740 5479996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0645 223 394 Acyl Lipid Metabolism Gene Families AT1G05630 32.161 3.23e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0645 K24221 - gmx:100794203 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1543 11 19644999 19651084 Aed6g0645 6 5476740 5479996 PCT