Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1543 ATGAAGGCAAGGAGAGGAAAACGTTCTGAGGCCTTCTGGCCCTCCATTGTGATGAAGAAATGGTTAAACATGAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTGGACACTGAACCTGAGAGTGAAGAGGATGCTTGCTCTCCAAGAGGCTCAAGATTACAAGTGCGTGAAGATAGTCCACTTAGAACAGAAGGGGTTCAATCCATATTCCCAAGCCTAACATCAGGCAATTCTCCATTCCCTTTTTCAGCATCTAATGCATCTTCTTGTAAGGGCCGCAAGACAAGACACAGAAGAGGAAAATCAGAAACTCTGCGTGCCCAGTACATAAACACGAAGGAAGTGAGGTCTGGCATGACATCATTAGAGGTAACAATTGGCACTTGGAATGTTGCTGGAAGACATCCATGTGAGGATCTTGAGATTGATGACTGGCTTTGTACCGAAGATCCAGCTGATATTTACATTCTTGGTTTTCAGGAGGTAGTTCCATTGAATGCTGGAAATGTGTTAGGAGCAGAAGATAACACACCTATCCCAAAATGGGAGGGAATCATTCGAAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTGCTAAGAACCTCTTCTGCTGCTGATCTTCTAGCAGACACTATAGATGCTGATAATCCAATTCCAATAGATATGATGATTGAGGAGTATGTAGCAACAGTTGATAAGAATGAGGTGGAACAGCAGGAAGTGAAAAGCATAATTGACATAGAGAATAACTTACAGTTGAGGAGAATATATGGCATTGATTTTGACTGGCCTGAACGTTCCTTAGATGCGGTCCCCCAAATTGTTGATTCAAGCTCAAAGTTGCGGAGGGTACTAAGCAGCTCAGCCAGAATTGGCTTTAACAGGCATGAGAGTAGTTCGGTATATGGTGTTGGATTGAAACGTTCACACCACAGTTCTGGAAACTTAGGCCTGTTATGGCAAGAACAACAAGTGATACCTGAAGAAGTTGTTGATTCCTTAGAAGATGTCTCTGATGTGTTATCAGCTGAGGAAGATGATGCTTTTATCATACCGAATGACGAGGACGATAATGAATTAGGTACAACGAAATCCTGTCCAAGTGCAAGGTATGTCCGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCCGTTTGGGTTCAGAGGAGGTTGAGAAGGCACGTTAATAATTTGAAAGTTTCCCCGGTTGGAGTTGGACTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCGATTAGTATGTCTCTCTTTCAGTCACGTATGTGCTTTGTTTGTTCACATTTGACTTCTGGTCAGAAGGAAGGGGCTGAACATAGGCGAAACGCTGATGTTCATGAAATTCTAAGACGCACTTGCTTCTCATCATCTGTCTTTGATGCAGATCAACCACAAACAATCCCATCTCATGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTAGTGGCTCTAAAGAAGTGGGATGAGTTGATGAATTATGATCAGCTAAGCAAAGAAATGCGTATTGGGCGTGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGGAATTAACTCTGATAGATATGTCGGTGAGAGCCCGAAAGAAGGGGAAAAAAGAAGATCTCCAGCTTGGTGTGATCGTATATTGTGGCTAGGGAAAGGAATAAAACAACTACAATATGGACGTGCAGAAATGAAGCTCTCAGATCATAGACCAGTTAGTTCAGTCTTCTTGGTTGATGTTGAAGTATTTGACCATCGCAAGCTAAAGAGAGCTCTACATATCACTAGTACAGCAGTAGTACACCCAGAGATCTTCCTTGATCATGAATACTACGAAATATAA 1944 0.4213 MKARRGKRSEAFWPSIVMKKWLNMKPKVNDFSEDEVDTEPESEEDACSPRGSRLQVREDSPLRTEGVQSIFPSLTSGNSPFPFSASNASSCKGRKTRHRRGKSETLRAQYINTKEVRSGMTSLEVTIGTWNVAGRHPCEDLEIDDWLCTEDPADIYILGFQEVVPLNAGNVLGAEDNTPIPKWEGIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDADNPIPIDMMIEEYVATVDKNEVEQQEVKSIIDIENNLQLRRIYGIDFDWPERSLDAVPQIVDSSSKLRRVLSSSARIGFNRHESSSVYGVGLKRSHHSSGNLGLLWQEQQVIPEEVVDSLEDVSDVLSAEEDDAFIIPNDEDDNELGTTKSCPSARYVRIVSKQMVGIYVSVWVQRRLRRHVNNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGQKEGAEHRRNADVHEILRRTCFSSSVFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALKKWDELMNYDQLSKEMRIGRVFDGWKEGLINFPPTYKYGINSDRYVGESPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEMKLSDHRPVSSVFLVDVEVFDHRKLKRALHITSTAVVHPEIFLDHEYYEI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1543 647 Gene3D Endonuclease/exonuclease/phosphatase 308 638 IPR036691 -
Aed11g1543 647 MobiDBLite consensus disorder prediction 192 211 - -
Aed11g1543 647 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 642 - -
Aed11g1543 647 MobiDBLite consensus disorder prediction 31 62 - -
Aed11g1543 647 SUPERFAMILY DNase I-like 119 627 IPR036691 -
Aed11g1543 647 MobiDBLite consensus disorder prediction 43 60 - -
Aed11g1543 647 SMART i5p_5 306 618 IPR000300 GO:0016791|GO:0046856
Aed11g1543 647 Gene3D Endonuclease/exonuclease/phosphatase 102 207 IPR036691 -
Aed11g1543 647 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 642 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1543 Aed-Chr11 19644999 19651084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1543 384 583 Acyl Lipid Metabolism Gene Families AT1G05630 35.398 3.25e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1543 K24221 - gsj:114422956 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1543 11 19644999 19651084 Aed6g0645 6 5476740 5479996 PCT