Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0639 ATGGCAGAGTTACCAGGATATTGTGGTTACTGCTTTAACATATGGAAACTTGTCCTTTTGGCAATTTTGGTTACTGGAGGAATTGTTTTGCAAATTTTGGCATGTGCATTGTATAATAATTGGTGGCCAATGCTAACAGCAATAACATATGTGCTTCTTCCAATGCCATTGCTCTTCTTTGCGGGATCTGAACGTTCTTCTTTATTTTCTGAATCAGATAGCAGATGGGTGAATGCAACCAAGTTCTTAACTGGGGCCTCAGCTGTTGGAAGCATTGCCATTCCAGTCATATTAAAGCATTCTGGTGTTATAGGTTGCGGAGCCCTTGCAATGGAACTCTCATCCTTCTTTGTGTTTGTATTTGCCATAATGTGTTACATTAGGATGAATGATGAAAATAATTATAGTATTATTTGA 417 0.3813 MAELPGYCGYCFNIWKLVLLAILVTGGIVLQILACALYNNWWPMLTAITYVLLPMPLLFFAGSERSSLFSESDSRWVNATKFLTGASAVGSIAIPVILKHSGVIGCGALAMELSSFFVFVFAIMCYIRMNDENNYSII 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0639 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 135 - -
Aed6g0639 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
Aed6g0639 138 PANTHER LEPTIN RECEPTOR-RELATED 1 135 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0639 Aed-Chr6 5422631 5423556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0639 1 138 EF-hand Containing Proteins AT1G32410 65.714 4.85e-62 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0639 - - gmx:100775400 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1549 11 19688384 19691054 Aed6g0639 6 5422631 5423556 PCT