Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1549 ATGGCAGACTTACCAGGGCATGTGCGTGCCTGTTTGAACACAGGGAAGCTTGCCTCCTTGGCAATTTTGGTCTCTGGAGGAATCGTCTTACAAATTTTGGCATGTGCCCTGTACAATAACTGGTGGCCGATGCTGAGTGTGATAACGTATGTGCTTCTTCCAATGCCTTTGCTGTTCTTCGCGGGGTCCGATGAATCTATATTTTCTGAATCTGATAATAGCTGGGTGAATTTTACCAAGTTCTTGACGGGAGCCTCAATTGTGGGAGGCATTGCCATTCCAAGCATATTAAAGCATGCTGGGGTTATCGGTTGGGGAGCCTTTGCAATGGAACTCTCTTCCTACTTTGTGTTTGGAATGGCCGTAATATGTTACCTTGGGATGAGTGGTGATGATGATTACGGTATCCTATGA 414 0.4614 MADLPGHVRACLNTGKLASLAILVSGGIVLQILACALYNNWWPMLSVITYVLLPMPLLFFAGSDESIFSESDNSWVNFTKFLTGASIVGGIAIPSILKHAGVIGWGAFAMELSSYFVFGMAVICYLGMSGDDDYGIL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1549 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Aed11g1549 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
Aed11g1549 137 Pfam Vacuolar protein sorting 55 18 130 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1549 Aed-Chr11 19688384 19691054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1549 1 134 EF-hand Containing Proteins AT1G32410 70.803 2.70e-64 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1549 - - gmx:100500037 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1549 11 19688384 19691054 Aed6g0639 6 5422631 5423556 PCT