Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0614 ATGTACAAAGAACGAGAGCGAGGTGGTGTCTCTGTTTCCTCTGTTTCGGCCTCCAAATCGGAGGATCGGAAGCGAATCAACGACGTTCTCGATAAGCACTTGGAACGATCCTCTCCGTCCACTTCGCGCCCCATCATCGCCGCCGCCTCCAAAAACGCCAACAACCTCCAAGCGGAGGAATCTGAAACGGAGAGTGAAGAGTCTGATGTTAGTGGCTCTGATGGAGATGACACCTCTTGGATCTCGTGGTTCTGCAATCTCAGAGGGAATGAGTTTTTCTGTGAGGTAGATGATGATTACATTCAGGATGACTTTAACCTTTGTGGATTGAGCAGTCAAGTGCCCTACTATGATTATGCCCTTGATTTGATTCTCGATGTTGAATCATCCCATGAGGAACAGAATGAGTTGATTGAATCAGCGGCGGAAATGCTTTATGGTATGATTCATGCCCGATATGTGTTGACCAGCAAAGGAATGGCTGCCATGCTTGACAAATACAAGAACTATGATTTTGGCAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGCCTTCCTGTTGGTCAGTCAGACATTCCTCGGTCAAGTACCGTGAAAATATACTGCCCTAGGTGTGAAGACCTTTACTATCCACGATCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACACCTCTTCTTGATGACTTATGGACAACTGAAGCCACAGAAACCAGCACAAGGCTATGTTCCAAGAGTTTTTGGGTTCAAAGTTCACAAGCCATAA 786 0.4606 MYKERERGGVSVSSVSASKSEDRKRINDVLDKHLERSSPSTSRPIIAAASKNANNLQAEESETESEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHEEQNELIESAAEMLYGMIHARYVLTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKVHKP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0614 261 ProSitePatterns Casein kinase II regulatory subunit signature. 175 206 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 MobiDBLite consensus disorder prediction 39 59 - -
Aed6g0614 261 PANTHER CASEIN KINASE II SUBUNIT BETA 1 45 - -
Aed6g0614 261 MobiDBLite consensus disorder prediction 1 75 - -
Aed6g0614 261 PRINTS Casein kinase II regulatory subunit family signature 193 214 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 PRINTS Casein kinase II regulatory subunit family signature 146 167 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 PRINTS Casein kinase II regulatory subunit family signature 79 95 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 PRINTS Casein kinase II regulatory subunit family signature 96 110 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 PRINTS Casein kinase II regulatory subunit family signature 221 238 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 PRINTS Casein kinase II regulatory subunit family signature 171 192 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 Gene3D - 172 246 - -
Aed6g0614 261 PANTHER CASEIN KINASE II SUBUNIT BETA 51 260 - -
Aed6g0614 261 Pfam Casein kinase II regulatory subunit 79 257 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 MobiDBLite consensus disorder prediction 18 38 - -
Aed6g0614 261 SUPERFAMILY Casein kinase II beta subunit 77 260 IPR035991 GO:0005956|GO:0019887
Aed6g0614 261 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 72 171 IPR016149 GO:0005956|GO:0019887
Aed6g0614 261 PANTHER CASEIN KINASE II SUBUNIT BETA 1 45 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 PANTHER CASEIN KINASE II SUBUNIT BETA 51 260 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 SMART CK_II_beta_2 79 257 IPR000704 GO:0005956|GO:0019887
Aed6g0614 261 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0614 Aed-Chr6 5228911 5231663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0614 K03115 - gmx:100793573 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1570 11 19868962 19872172 Aed6g0614 6 5228911 5231663 PCT