Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1570 ATGTACAGAGAGCGAGGAGGCGTCGGATCCAAATCGGAGGTAACTTCCGCTGATCGGAAGCGAATCAACGACGTCCTCGACAAACAGCTTGAACGATCCTCACCGTCCACATCCAGAGCCGCCGCCACCATCAACGGCAAGGACCGCTCCTCCTCTTCCCTCTTAGCCGCCGCCAAGGACTCCCGCTCCGCCTCCGTCACCGCCCCTATCTCCAAAAATTCCAACGCCTCCGACGATGCAGAGGAATCTGAAACAGATAGCGAGGAGTCTGATGTTAGTGGTTCCGATGGAGATGACACGTCTTGGATCTCATGGTTCTGCAATTTGAGGGGAAATGAGTTCTTCTGCGAGGTTGATGACGATTACATCCAGGATGACTTCAACCTGTGCGGATTAAGCAGTCAAGTGCCTTACTATGATTATGCTCTGGATTTGATTTTGGATGTTGAATCCTCCCACGCAGCCGAGATGCTTTATGGTCTGATTCATGCCCGGTACATATTGACAAGCAAAGGAATGGCTGCAATGCTGGACAAGTACAAGAACTATGATTTTGGCAGATGCCCACGAGTTTACTGCTCTGGACAACCTTGTATACCAGTTGGTCAGTCAGACATCCCTAGGTCTAGTACTGTGAAAATATACTGCCCTAGGTGCGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCTCACCTGTTCCTGATGACTTATGGACAACTAAAGCCACAGAAACCATCACAGAGCTATGTCCCGAGAGTTTTTGGCTTTAAACTTCACAAGCCCTGA 825 0.4897 MYRERGGVGSKSEVTSADRKRINDVLDKQLERSSPSTSRAAATINGKDRSSSSLLAAAKDSRSASVTAPISKNSNASDDAEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCIPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1570 274 MobiDBLite consensus disorder prediction 29 76 - -
Aed11g1570 274 ProSitePatterns Casein kinase II regulatory subunit signature. 188 219 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 SUPERFAMILY Casein kinase II beta subunit 99 273 IPR035991 GO:0005956|GO:0019887
Aed11g1570 274 PRINTS Casein kinase II regulatory subunit family signature 184 205 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 PRINTS Casein kinase II regulatory subunit family signature 206 227 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 PRINTS Casein kinase II regulatory subunit family signature 234 251 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 PRINTS Casein kinase II regulatory subunit family signature 118 132 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 PRINTS Casein kinase II regulatory subunit family signature 159 180 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 PRINTS Casein kinase II regulatory subunit family signature 101 117 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 MobiDBLite consensus disorder prediction 1 97 - -
Aed11g1570 274 MobiDBLite consensus disorder prediction 80 95 - -
Aed11g1570 274 Pfam Casein kinase II regulatory subunit 101 270 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 273 - -
Aed11g1570 274 Gene3D - 185 259 - -
Aed11g1570 274 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 94 184 IPR016149 GO:0005956|GO:0019887
Aed11g1570 274 MobiDBLite consensus disorder prediction 14 28 - -
Aed11g1570 274 PANTHER CASEIN KINASE II SUBUNIT BETA 1 273 IPR000704 GO:0005956|GO:0019887
Aed11g1570 274 SMART CK_II_beta_2 101 270 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1570 Aed-Chr11 19868962 19872172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1570 K03115 - gmx:100780095 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1570 11 19868962 19872172 Aed11g1570 11 19868962 19872172 ECH
Aed11g1570 11 19868962 19872172 Aed6g0614 6 5228911 5231663 PCT