Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0545 ATGGTACTCATGCCTCTAACACACACTCTTTCCCATTCCCAAGCCCAATTCAACAGTATCCACCACCTTCTCAAATCCACCTCCAACCGTTCCGCAAAACGGTTCCGCCGCCAACTCTCCCTCCCGCTCTCCCCCGGCAGCGACTACACTCTCTCATTCAGCCTGGGCCCTCAGGTCCAGGCCCAGCCCATAACGCTCTACATGGACACCGGCAGCGACTTAGTCTGGTTCCCCTGCGCCCCTTTTAAATGCATACTCTGCGAGGGTAAGCCCAACGAGCCCAACGCCTCTCCCCCAACTAACGTCACCCGAAGCGTCGCCGTTTCGTGCAAGTCCGCCGCGTGCTCCGCGGCGCACGGCTTAGCCTCTTCCTCCGATCTCTGCGCCACCGCTCGTTGCCCTCTCGAATCAATCGAAACCTCCGATTGCGCTAATTTCAAGTGTCCGCCGTTTTACTATGCGTACGGCGACGGAAGCTTAATCGCGCGTCTCTATCGCGACACGCTTTCGCTCTCTTCTTTGTTTCTCAGAAACTTCACGTTCGGTTGCGCTCACACAACTCTCGCCGAACCAACCGGAGTCGCTGGATTCGGTCGCGGCTTGCTCTCTCTCCCGGCGCAGCTAGCTACGCTCTCTCCTCAACTCGGAAATAGGTTTTCGTATTGTTTAGTTTCTCACTCGTTTGACTCGGAACGAGTGAGGAAACCGAGTCCACTCATTCTTGGACGTTACGAGGAGAAGATTGGCGGTGGCGGAGTGGCTGAGTTTGTGTACACGCCTATGCTTGAAAACCCTAAGCATCCTTATTTCTATACCGTTGGCTTAATCGGAGTCTCCGTCGGGAAAAAGACTATCCCGGCGCCGGAGATGCTTCGGCGCGTGAATGCGCAAGGCGACGGCGGCGTGGTTGTGGATTCTGGCACGACGTTCACGATGTTACCGGCGGGGTTTTACAACTCGGTGGTGGACGAGTTTGACCGGCGAGTCGGGCGAGTCAACTCGCGCGCGCGTAAGATTGAGGAGAAAACCGGACTCGCGCCGTGCTATTATTTGAACTCTGTGGCGGAAGTGCCTGCTCTGACGCTGCGTTTTGCTGGGGGAAATTCGAGTGTGGTGCTGCCTAGGAAGAACTATTTCTACGAGTTTTTAGACGGTAGTGATGGGACGAAGAAGGGAAAGAGGAGGAAGGTAGGGTGTTTGATGGTGATGAACGGTGGAGATGAAGCTGACTTGAGCGGTGGGCCCGGGGCCACACTGGGGAATTACCAGCAGCAGGGGTTTGAGGTTGAGTATGACCTGGAAGTGAAGCGCGTGGGGTTTGCTAGGAGGCAGTGCGCGTCGCTTTGGGAGAGACTCAATCGCGACAATAACTAG 1374 0.5597 MVLMPLTHTLSHSQAQFNSIHHLLKSTSNRSAKRFRRQLSLPLSPGSDYTLSFSLGPQVQAQPITLYMDTGSDLVWFPCAPFKCILCEGKPNEPNASPPTNVTRSVAVSCKSAACSAAHGLASSSDLCATARCPLESIETSDCANFKCPPFYYAYGDGSLIARLYRDTLSLSSLFLRNFTFGCAHTTLAEPTGVAGFGRGLLSLPAQLATLSPQLGNRFSYCLVSHSFDSERVRKPSPLILGRYEEKIGGGGVAEFVYTPMLENPKHPYFYTVGLIGVSVGKKTIPAPEMLRRVNAQGDGGVVVDSGTTFTMLPAGFYNSVVDEFDRRVGRVNSRARKIEEKTGLAPCYYLNSVAEVPALTLRFAGGNSSVVLPRKNYFYEFLDGSDGTKKGKRRKVGCLMVMNGGDEADLSGGPGATLGNYQQQGFEVEYDLEVKRVGFARRQCASLWERLNRDNN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0545 457 Gene3D Acid Proteases 39 242 IPR021109 -
Aed6g0545 457 PANTHER OS07G0603500 PROTEIN-RELATED 2 450 - -
Aed6g0545 457 Gene3D Acid Proteases 252 450 IPR021109 -
Aed6g0545 457 SUPERFAMILY Acid proteases 46 450 IPR021109 -
Aed6g0545 457 CDD pepsin_A_like_plant 49 445 IPR034161 -
Aed6g0545 457 PANTHER BNAA01G17170D PROTEIN 2 450 - -
Aed6g0545 457 ProSiteProfiles Peptidase family A1 domain profile. 49 441 IPR033121 -
Aed6g0545 457 Pfam Xylanase inhibitor C-terminal 271 441 IPR032799 -
Aed6g0545 457 Pfam Xylanase inhibitor N-terminal 49 242 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0545 Aed-Chr6 4619936 4621309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0545 - - gmx:100805699 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0545 6 4619936 4621309 Aed6g0545 6 4619936 4621309 ECH
Aed11g1629 11 20239457 20240599 Aed6g0545 6 4619936 4621309 PCT