Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1629 ATGGACACAGGCAGCGACCTCGTTTGGTTCCCATGCGCTCCCTTCGAATGCATTCTCTGTGAAGGCAAATTCAACGCCACTAAACCTCTTAACATCACGCGTTCTCACCGTGTCTCGTGCCAATCCCATGCATGTTCCTCAGCACACTCCTCCATCTCCTCCCACGACCTCTGCGCAATCGCACGTTGTCCTCTAGACAACATCGAAACCTCCGATTGCTCTTCTGCCACGTGTCCACCTTTCTACTACGCTTACGGCGACGGAAGCTTCATCGCGCACCTCCATCGCGATACTCTCTCCATGTCTTCGCTTTTCGTTAAAAACTTCACCTTCGGTTGCGCCCACACCGCACTCGCCGAACCCACTGGCGTCGCTGGTTTCGGTCGGGGCCTGTTGTCCCTCCCTGCGCAACTTGCTACCTTTTCTCCAAACCTCGGTAACCGTTTTTCTTATTGCTTGGTTTCTCATTCTTTCGACAAACAACGTGTTCGCAAACCGAGTCCACTCATTCTCGGCCGCTACGATGACTCCGGCGACCGTGTTGACTTTGTTTACACCTCCATGCTTCGGAATCCCAAACATTCTTATTTCTATTGCGTCGGCCTCACCGGAATCTCCGTCGGGAAGAAGACTATTCCGGCGCCGGAGATGCTGCGGAGGGTGGACCGCAGAGGGGATGGCGGCGTGGTTGTTGATAGCGGAACCACTTTCACGATGCTGCCGGCGAGTTTGTATAATTCGGTGGTTGCTGAGTTCGACCGGCGAGTCGGGAGAGTTCACAAGCGCGCGAGTGAGGTGGAGGAGAAAACGGGCCTCGGGCCGTGTTATTTTTTGGAAGGGTTGGTGGAAGTTCCCACGGTGACGTGGCATTTTGTGGGGAATAATTCCAATGTGGTGCTGCCTAGGAGGAATTATTTTTACGAGTTTTTGGACGGTGAGGATGGGGTTAGGAGGAAGGTGGGGTGTATGATGCTGATGAACGGTGGTGATGACGCTGACCTGAGCGGTGGACCCGGGGCCATACTTGGCAACTATCAACAGCAAGGGTTTGAGGTCGTCTATGACTTGGAAAACCAGCGCGTGGGATTCGCTAAGAGGCAGTGCGCGTCGCTTTGGGATACCCTCAACCGTGACAAAAACTAG 1143 0.5407 MDTGSDLVWFPCAPFECILCEGKFNATKPLNITRSHRVSCQSHACSSAHSSISSHDLCAIARCPLDNIETSDCSSATCPPFYYAYGDGSFIAHLHRDTLSMSSLFVKNFTFGCAHTALAEPTGVAGFGRGLLSLPAQLATFSPNLGNRFSYCLVSHSFDKQRVRKPSPLILGRYDDSGDRVDFVYTSMLRNPKHSYFYCVGLTGISVGKKTIPAPEMLRRVDRRGDGGVVVDSGTTFTMLPASLYNSVVAEFDRRVGRVHKRASEVEEKTGLGPCYFLEGLVEVPTVTWHFVGNNSNVVLPRRNYFYEFLDGEDGVRRKVGCMMLMNGGDDADLSGGPGAILGNYQQQGFEVVYDLENQRVGFAKRQCASLWDTLNRDKN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1629 380 CDD pepsin_A_like_plant 78 368 IPR034161 -
Aed11g1629 380 Gene3D Acid Proteases 1 172 IPR021109 -
Aed11g1629 380 Pfam Xylanase inhibitor N-terminal 1 172 IPR032861 -
Aed11g1629 380 SUPERFAMILY Acid proteases 1 373 IPR021109 -
Aed11g1629 380 Pfam Xylanase inhibitor C-terminal 198 364 IPR032799 -
Aed11g1629 380 Gene3D Acid Proteases 175 374 IPR021109 -
Aed11g1629 380 PANTHER ASPARTYL PROTEASES 1 377 IPR001461 GO:0004190|GO:0006508
Aed11g1629 380 ProSiteProfiles Peptidase family A1 domain profile. 1 364 IPR033121 -
Aed11g1629 380 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 229 240 IPR001969 GO:0004190|GO:0006508
Aed11g1629 380 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1629 Aed-Chr11 20239457 20240599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1629 1 371 Miscellaneous Gene Families AT1G77480 24.745 6.09e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1629 - - gmx:100807884 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1629 11 20239457 20240599 Aed11g1629 11 20239457 20240599 ECH
Aed11g1629 11 20239457 20240599 Aed6g0545 6 4619936 4621309 PCT