Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0544 ATGAGCACTGGGGAGCTTCTCAGCATCGAACCTATCGAACTCAAGTTTCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCCAATAAGACTGATAGCTATGTAGCCTTCAAGGTGAAAACGACGAATCCAAAGAAGTATTGTGTTCGTCCGAACACTGGAATCGTTGCGCCACGATCTACGTGTGATGTTATCGTTACCATGCAAGCGCAGAAAGAGTCTCCTTCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACTGTTGATGGGACCAGTCCGAAGGAAATCACTGCAGAAATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCACCTCAGCCACCGTCCCCAGTCCCAGAAGGTTCCGAGGAAGGATCTTCACCTAGAGGTTCTGTTTCAGAGAATGGAACTGCCCATGGTTCCGACTTCACACAAGCAGCAAGAGGATTTACTGAAAGACCTGAGGCTCAAGACAAATCTGCAGAGGCTAGAGCTCTTATCTCAATGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAATAGCAAGCTCCGCCAAGAACTGGAGCTGCTGAAGCGAGAAGGCAACAAAAGTCGTGGTGGAGTCTCGTTTGTCATTGTCGTATTAATTGGCTTGCTTGGCGTAATTATGGGGTATCTCATGAAGAAGACATAA 726 0.4573 MSTGELLSIEPIELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVAPRSTCDVIVTMQAQKESPSDMQCKDKFLLQSVKTVDGTSPKEITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGTAHGSDFTQAARGFTERPEAQDKSAEARALISMLTEEKNNAIQQNSKLRQELELLKREGNKSRGGVSFVIVVLIGLLGVIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0544 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Aed6g0544 241 Coils Coil 184 211 - -
Aed6g0544 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Aed6g0544 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Aed6g0544 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Aed6g0544 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Aed6g0544 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Aed6g0544 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Aed6g0544 241 MobiDBLite consensus disorder prediction 143 159 - -
Aed6g0544 241 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0544 Aed-Chr6 4605331 4610781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0544 - - gmx:100527687 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0544 6 4605331 4610781 Aed6g0544 6 4605331 4610781 ECH
Aed11g1631 11 20247171 20250988 Aed6g0544 6 4605331 4610781 PCT
Aed6g0544 6 4605331 4610781 Aed11g1582 11 19948174 19950533 PCT