Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1582 ATGACCTCCTCTCCACGCATCTCCGTTAGTCCCGACGAACTCCGCTTCCATTTTGAGTTGGACAAACAAACATTTTGCGATCTTAAGGTCCTCAATAACTCCGAGAACCATGTTGCTTTCAAGGTCAAAACCACTTCGCCAAAGAAATACTTCGTGCGACCTAACACCGGTGTTGTACATCCCTGGGACTCGTGTATTATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGGATCCAAATACTGATGTTGATGATCTCCCAGCAGATATTTTTAATAAGGAGAGTGGTAATTCAGTAGAGGAGATGAAATTAAGAGTTACATATATCTCTGCTACCTCACCTGAAGGAAGCTCTGAAGATGATGCATCGAAGAACTCACAAAAACTCGATACCTCTTCTAGTCAGGCTTTACATAATCTGAAAGAAGAAAGAGATGTCGCTGCCAGACAAACGAGACAGCTGCAACAGGAACTGGACATGCTGAAAAGACGAAGAAACCGAAGTGATTCTGGGTTTTCCTTCATCTTTGCCATTTCTGTGGGTCTCCTTGGAGTTTTACTTGGCTTTCTTTTTAAAGTTTTATTCTCTTCACCATCTACAGAATGA 657 0.4262 MTSSPRISVSPDELRFHFELDKQTFCDLKVLNNSENHVAFKVKTTSPKKYFVRPNTGVVHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVDPNTDVDDLPADIFNKESGNSVEEMKLRVTYISATSPEGSSEDDASKNSQKLDTSSSQALHNLKEERDVAARQTRQLQQELDMLKRRRNRSDSGFSFIFAISVGLLGVLLGFLFKVLFSSPSTE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1582 218 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Aed11g1582 218 SUPERFAMILY PapD-like 2 134 IPR008962 -
Aed11g1582 218 MobiDBLite consensus disorder prediction 128 154 - -
Aed11g1582 218 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 4 215 - -
Aed11g1582 218 Coils Coil 154 181 - -
Aed11g1582 218 PIRSF VAMP_assoc_prot 1 154 IPR016763 GO:0005789
Aed11g1582 218 PIRSF VAMP_assoc_prot 128 210 IPR016763 GO:0005789
Aed11g1582 218 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 126 IPR000535 -
Aed11g1582 218 Gene3D Immunoglobulins 3 129 IPR013783 -
Aed11g1582 218 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 4 215 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1582 Aed-Chr11 19948174 19950533 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1582 - - gmx:100794270 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0544 6 4605331 4610781 Aed11g1582 11 19948174 19950533 PCT