Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0520 ATGCGAGTGAAGGAAATGCACCCGCTGTGCTGCATCTCGCTGGAGAGTCCGGGGATCGGGAGCGACTCGCCGGAGCCGGACGCGGCGGCGCTGTCGAGGACGAGGAGTCTTCCGACGGGTGGATCCGACGGCATTGCGCGGCGGGGATCGGAGGCCACGGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAGGGATGGAGATCTCGTTGGTTCCTCCTCCGCAATGGCGTCCTCTCCTATGCCAAGATCCGCTGGCCGGAAAATCTCAACCTCCTCTCTCCGGTCGACGACGTCCGTCTCATCGGAGAAGTCACGGCCAACCGCCTCGCCAGAGAAGCCTCCCCCGCCGCCGCCGCCACCATGCGCTGGAAGAATCACAAACCTCCTTCCTCCTCCTCCTCCGTGGTCCATCTCAAGGTGGCCGCGGAGGCTAGGAATAGTCTACATAAGCCCTATGGCATTAACTTGCAGTCACGTCATGCCTCTCCTCTCTCTGCCTTTTCTTCTTCCACATTGGTTGAAATCAATTTGCCTCTGCACCTCTTCATTCGTTCTTCCTGGCTCCCGCTCTTTTCATCGCAAATTCCAGTCAACATTGAAGAGGCAGTGTTGTTCTCCCCGGATAAAAAGGGAAAAACAAAAGGAAGTTGGAGACAGTTATTTTTATGTGACATTATTAAGCAGATCTCGTCGTTCAGAGAGAGCAAGTCAGACGATAGACGGTTCTATATATTCACAGCAACAAAAACTCTCCATCTGAGGACCGATTCGAGGAAGGACCGTGTGGCGTGGATACAAGCTTTGGTTTCAAGCCGTGGATTGTACCCACTACGACCATTCAGTGACCATCTCTCCCTCGCACCTAATCATGTAGCTTTGTCAACCCAGAAGCTCAAGAATCGCTTGCTTGAAGAGGGTAGCAGTGAGAACCTTGTCAAGGAGTGCGAGCAAATCATGCTTGCTGAGTTCTCGGGATTTCAGGAGCAACTTCAGATACTATGTCAAGAACGAATGAATTTGCTTGATACAATAAGACAGCTGGAGCAGGCTGCTAATATTGAACCCGAGGCCACTGCCTTGCATGACAGTGAATACCAATTATCAAAGAGTGCATTTTCAAGTCTAGGACGTGGAAAATATAGTGAATGCAGTACTACTGAATCATCTGATGATATTGAGAAGCAGGAGATGGAGGAGGTGTCAGATGAAGATGAAATCTCATATTATGACACTAAAGAGTATTTTACAGAGCATGGTTTTAGGTGTGGATCAACAGGAGGTTTGGATCCAATTAACATGTCTGGGGAAGTTAACACACAGTGCATTGATTTGAAGAACAGTCTTGTTGGGAAGACTATCAATGATTTTGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAAGAGAAAGGCGTTAGTCTTTGGTCAATTATCAAAGACAATGTGGGCAAAGATCTCACACGAGTGTGTCTTCCTGTATACTTTAATGAACCAATATCATCTCTGCAGAAATGTTTTGAGGACTTGGAGTACTCTTTTCTTCTGGATCGAGCTTATGAATATGGAAAATCAGGAAACAGTCTCCTTCGGGCACTGAATGTTGCTGCCTTTGCAATTTCTGGATACGCATCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGTGAAACTTACGAAGCTGATTTTCCCGACAAAGGTGTTCGGTTCTTTTCTGAGAAGGTGAGTCACCATCCAACTGTCGTTGCCTGCCACTGTGAGGGTAGAGGGTGGAGGTTTTGGGCTGACAGTAACATTCGGTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGAGTTTTGACCCTAGAGTTTGATGATGGTGAAATATTTCAATGGAGCAAGGTCACGACTACAATTTATAATCTTATCCTAGGCAAAATATATTGTGATCATCATGGGAACATGGACATCCGTGGTAACCGCCAACATTCGTGCAAACTCAAATTCAAAGAACAGGCCATTCTTGATCGAAATCCTCACCAGGTGCATGGCTTTGTTGAAGATGTAAATGGAAAAAAGTTTGCAACATTATTAGGCAAGTGGGATGACAGCATATATTATGTTAATGGTGAACTGAATGTGAAGCCAAAAGATTTCACTATGTCAGCAGCAAACTTGTTGTGGAAAAGAACTAAGCCACCTTCTAATCTCACTCGCTACAATTTGACATCATTTGCCATCACACTGAATGAGCTTACTCCAGGCCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAAAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGATGGCAGCCAAGGTGGTTCCACAGAGAAGATGAAAATGGAACATTTCTATATATTGGTGGGTATTGGGAAGCAAGGTCTCAAGGAAAATGGAATGGATGCCCAAGTATCTTCGGTGAAATTCATGAAGGCAATTTTGATCCTTTAGCTGCATCTTGA 2580 0.4632 MRVKEMHPLCCISLESPGIGSDSPEPDAAALSRTRSLPTGGSDGIARRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRWPENLNLLSPVDDVRLIGEVTANRLAREASPAAAATMRWKNHKPPSSSSSVVHLKVAAEARNSLHKPYGINLQSRHASPLSAFSSSTLVEINLPLHLFIRSSWLPLFSSQIPVNIEEAVLFSPDKKGKTKGSWRQLFLCDIIKQISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSSRGLYPLRPFSDHLSLAPNHVALSTQKLKNRLLEEGSSENLVKECEQIMLAEFSGFQEQLQILCQERMNLLDTIRQLEQAANIEPEATALHDSEYQLSKSAFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTEHGFRCGSTGGLDPINMSGEVNTQCIDLKNSLVGKTINDFGYPQIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKSGNSLLRALNVAAFAISGYASSEGRHCKPFNPLLGETYEADFPDKGVRFFSEKVSHHPTVVACHCEGRGWRFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQHSCKLKFKEQAILDRNPHQVHGFVEDVNGKKFATLLGKWDDSIYYVNGELNVKPKDFTMSAANLLWKRTKPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWQPRWFHREDENGTFLYIGGYWEARSQGKWNGCPSIFGEIHEGNFDPLAAS 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0520 859 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 458 850 IPR000648 GO:0008289
Aed6g0520 859 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 120 IPR000648 GO:0008289
Aed6g0520 859 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 209 430 IPR000648 GO:0008289
Aed6g0520 859 MobiDBLite consensus disorder prediction 15 45 - -
Aed6g0520 859 SUPERFAMILY Oxysterol-binding protein-like 475 853 IPR037239 -
Aed6g0520 859 SMART PH_update 52 277 IPR001849 -
Aed6g0520 859 Gene3D - 566 738 - -
Aed6g0520 859 Pfam Oxysterol-binding protein 480 833 IPR000648 GO:0008289
Aed6g0520 859 Pfam Pleckstrin homology domain 56 147 - -
Aed6g0520 859 MobiDBLite consensus disorder prediction 384 405 - -
Aed6g0520 859 Coils Coil 777 806 - -
Aed6g0520 859 Gene3D - 199 274 IPR011993 -
Aed6g0520 859 Gene3D - 48 166 IPR011993 -
Aed6g0520 859 PANTHER BNAC03G64980D PROTEIN 458 850 - -
Aed6g0520 859 PANTHER BNAC03G64980D PROTEIN 4 120 - -
Aed6g0520 859 PANTHER BNAC03G64980D PROTEIN 209 430 - -
Aed6g0520 859 ProSiteProfiles PH domain profile. 51 275 IPR001849 -
Aed6g0520 859 Gene3D - 776 836 - -
Aed6g0520 859 Coils Coil 332 352 - -
Aed6g0520 859 SUPERFAMILY PH domain-like 46 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0520 Aed-Chr6 4489311 4499528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0520 K20456 - gmx:100793692 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0520 6 4489311 4499528 Aed6g0520 6 4489311 4499528 ECH
Aed11g1636 11 20284468 20292789 Aed6g0520 6 4489311 4499528 PCT