Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1636 ATGCGAGTGAAAGAGATGCACCCACTGTGCTGTATCTCCCTCGAGAGTCCCGGAATCGGCCAGTATTCGCCGGAGCGTGAGCCGGCGTCGCTTTTCCGAACCAGGAGCCTCCCGGCGGCGGGATCTCACGGCAATGCCGCTCAGGGATCGGAGACCACCGTCGCCGGCGTTCTCTACAAGTGGACCAATTATGGCAAAGGCTGGAGATCCCGGTGGTTCCTCTTGCGGAATGGCGTTCTCTCCTACGCTAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCACTCCTTCCGACGACGTTCGCCTCATCGGAGAGATTTCTACCAACTGTCTTGCACGAGTGGACGGCGCTGCCGCCACCGTCACTCGACGGAAGCATCGCAAAGCTTCTTCTTCTTCTTCTTCTTCTTCCGGCGTAGTCCATCTCAAGATTTGGTCGTTTAGAGAGAGCAAGTCAGATGATCGGCGTCTCTATATATTTACAGCAACGAAGACCCTCCATCTGAGAACTGACTCAAGGAAAGACAGGGTGACGTGGATACAAGCCTTGGTTTCAGCACGTGGTCTGTATCCTCTTCAACCACTCAATGATCATCTCTTACTTGCACCCATTGATATATCCATGTCAACCGAGAGGCTTAAGACACGCTTGCTTGAAGAGGGTACAAATGAGAACCTTGTCAGGGAGTGCGAGAAAATCATGCTCACAGAGTTCTCCGAAATGCAAGGACAACTTGAAGCAGTTAATACTGAGCCTGAGGCCTCTAGAATACACGATGGTGAATACCGACTAACAAAGAATGAGTTTTCAAGTCTTGGAGGTGGAAAATATAGTGAATGCAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGATGGAGGAGGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTGTTTTACAGAGCCTGATTGCAAGTGTGAGTTAGCAGGAGCTATGGATCAAGTGGACAGGTGTATGGAAGCCAACACACAATGTACGGATACAGAGAACATCCATCGTGAGAAAATGGCCTGTAATTATAAGCACCCTGAGATAGCAAGGCGAAAAAAACTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAATGTGGGAAAAGATCTAACGAGAGTTTGTCTCCCGGTATACTTTAATGAGCCGATATCATCCCTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTTCTGGATCAAGCTTATGAATACGGAAAATCAGGAAACGGTCTCCTTCGGGCACTGTATGTTGCTGCTTTTGCAGTTTCCGGATATGCGTCATCTGAAGGTCGTAATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTACGAAGCCGACTACCCCGACAAAGGAATTCGCTTCTTTTCCGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTAGAGTTCAGTGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACCTCGATCTATAATCTTATCCTTGGAAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGCAATCGTAAATATTCATGCAGACTCAAGTTCAAAGAGCAGACGATCCTTGACCGAAATCCTCGCCAGGTGCATGGATTTGTAGAAGAAGATGTAACGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTATTATATGAGTGGTAATGTAAATGTGAAGCCTAAAGATTTCAGTTCACCAAACGCATCCTTGCTATGGAAAAGGATAATGCCATCTCCTAATCTCACCCGTTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGATTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGATCAGACCAGATCAACGGCATCTAGAGGATGGGGAATACGAGAAGGCTAATTTGGAGAAACAAAGGTTGGAAAAGCGACAGAGAATGTCAAGAAAAATACAAGAAAGTGGTTGGAAGCCTAAGTGGTTCCGAAGAGAAGGTGAAAATGGAACATTTCGATACGTTGGTGGGTACTGGGAAGCGAGAGAGCTTGGAAGATGGGACGGGTGCCCTAATATATTTGGTGAATTTAATGAAGACTCTACCGATCCGTTAGAATGGGAGATTAAGCTTTGCGAAACCGCTGAAATTGAGATCGTCATGGTGTGTGTTGGACTTGGTGATATAGGAACAATGAACAATTCAAAGGGTAGCAAAATTAAACAGTTCGATGCTGCTGCTGCTGCTATGTGA 2394 0.4607 MRVKEMHPLCCISLESPGIGQYSPEREPASLFRTRSLPAAGSHGNAAQGSETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTPSDDVRLIGEISTNCLARVDGAAATVTRRKHRKASSSSSSSSGVVHLKIWSFRESKSDDRRLYIFTATKTLHLRTDSRKDRVTWIQALVSARGLYPLQPLNDHLLLAPIDISMSTERLKTRLLEEGTNENLVRECEKIMLTEFSEMQGQLEAVNTEPEASRIHDGEYRLTKNEFSSLGGGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRECFTEPDCKCELAGAMDQVDRCMEANTQCTDTENIHREKMACNYKHPEIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNGLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLDPVGVLTLEFSDGEIFQWSKVTTSIYNLILGKIYCDHHGNMDIRGNRKYSCRLKFKEQTILDRNPRQVHGFVEEDVTGKKVATLFGKWDDSMYYMSGNVNVKPKDFSSPNASLLWKRIMPSPNLTRYNLTPFAITLNELTPGLKEKLPPTDSRIRPDQRHLEDGEYEKANLEKQRLEKRQRMSRKIQESGWKPKWFRREGENGTFRYVGGYWEARELGRWDGCPNIFGEFNEDSTDPLEWEIKLCETAEIEIVMVCVGLGDIGTMNNSKGSKIKQFDAAAAAM 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1636 797 Coils Coil 673 702 - -
Aed11g1636 797 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 348 746 - -
Aed11g1636 797 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 321 - -
Aed11g1636 797 SMART PH_update 52 190 IPR001849 -
Aed11g1636 797 Pfam Pleckstrin homology domain 56 184 - -
Aed11g1636 797 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 348 746 IPR000648 GO:0008289
Aed11g1636 797 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 321 IPR000648 GO:0008289
Aed11g1636 797 Gene3D - 672 729 - -
Aed11g1636 797 ProSiteProfiles PH domain profile. 51 188 IPR001849 -
Aed11g1636 797 Pfam Oxysterol-binding protein 375 730 IPR000648 GO:0008289
Aed11g1636 797 Gene3D - 47 188 IPR011993 -
Aed11g1636 797 SUPERFAMILY PH domain-like 50 187 - -
Aed11g1636 797 SUPERFAMILY Oxysterol-binding protein-like 370 746 IPR037239 -
Aed11g1636 797 Gene3D - 461 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1636 Aed-Chr11 20284468 20292789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1636 K20456 - gmx:100819924 1440.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1636 11 20284468 20292789 Aed11g1636 11 20284468 20292789 ECH
Aed11g1636 11 20284468 20292789 Aed6g0520 6 4489311 4499528 PCT