Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0514 ATGGATCATCATCATCGCAAGCCATTGTTACCCACTTCCTCTTATGATGACGCTCCAAATCCAAATGCACGCACTCGCAAGGACCTTCTTTTAGCTATTTGCGGCTTGCTCTTGCTCTCTTCCCTTGTTGCCTTTGCGGGCTACAGTGCCTCCAACAACAACATCGTACTGAACGATGAACAACAACAACAACATAGTCCCACATCGGTGCCTTCTCCAAATTGGTACCCGGTTTCGCGGGGTGTTCCTTCCGGTGTGTCGGAGAAGTCATCGAACATGTTATTTGATTCAGAAGCATTTCCTTGGGACAATAGCATGTTGTCGTGGCAGAGAACCGCTTTTCATTTCCAACCAGAGAAAAACTGGATGAATGGTCCTATGTACTACAAGGGATGGTACCACTTTTTCTACCAATACAATCCGAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACATGCAGTTTCAAGGGACATGATCCATTGGCTTCACCTTCCACTAGCAATGGTAGCTGATCAATGGTACGACATGCAAGGTGTGTGGACAGGCTCAGCCACAATTCTACCAAACGGTGAAATCATAATGCTATACACAGGTTCCACCAACGAGTCAGTGCAGGTTCAAAACCTTGCATACCCTGCAGACCCCTCTGACCCTCTTCTTGTGGATTGGATCAAATACCCTCTGAACCCAGTTTTAGTGCCACCACAAGGAATTGGTGCAAAGGATTTTCGTGACCCTACAACAGCATGGCTCACCTCTGAAGGGAAGTGGCGCATCACCATAGGCTCCAAGCTTAACAAAACTGGCATTGCATTGGTCTATGACACTGTGGACTTCAGAAGCTATGAGCTCAAGGAGGGTTTGCTTCGCGCTGTTGCTGGTACCGGCATGTGGGAGTGTGTGGACTTCTTCCCTGTGTCTGAGAAATATGAGAATGGATTGGATACTTCTGTCAATGGGGCTGAGGTGAAGCATGTCATGAAGGTGAGCCTTGATGATGATAGACATGATTACTATTCCATTGGGACTTATGATGAGAGGAATGTTCTGTTCACACCAGATGATGCTAAGAATGATGTTGGTGTTGGATTGAGGTATGACTATGGAATATTCTATGCATCTAAAACAATAAAGAGAGGAGAATTTTGTGGGGTTGGATTGAGTATTCCTAGAACTATGAAGCTTGATAGGAAGACTGGCAGCAATTTACTTCAGTGGCCTGTTGCTGAAGTGGAGAGTTTGAGATTGAGAAGTGATGAATTCCAAAATTTGAAGGCTAAGCCAGGGTCAGTGGTGTCAGTAGATATTGAAACAGCCACACAGTTGGACATTGTTGCCGAGTTTGAGATAGACAAGGAAACCCTTGAGAAAACACCTGAATCCAACGATGAGTTCACGTGTGGCACTAGTGGTGGATCAAAACAACGTGGTGCCTTAGGACCTTTTGGCCTTTTGGTATTGGCAGATGAGGGGCTTTCTGAGTATACTCCTCAGTATTTTTATGTCATTAAAGGAAGCAATGGAAATCTCAAGACTTCCTTTTGCTCTGATCAATCAAGGTCTTCTTGGGCAAATGATGTTCGTAAGCAAATCGTTGGCAGTTCTGTTCCACTACTTAAAGGCGAAAAGTTTTCTTTGAGAATACTGGTGGATCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGGACGGTTGTGACATCTCGGGTATATCCAACAAAGGCAATATATGGAGCTGCTAAATTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCACTCAAAGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCACCCTGATCAGAAGAATTAA 1854 0.4477 MDHHHRKPLLPTSSYDDAPNPNARTRKDLLLAICGLLLLSSLVAFAGYSASNNNIVLNDEQQQQHSPTSVPSPNWYPVSRGVPSGVSEKSSNMLFDSEAFPWDNSMLSWQRTAFHFQPEKNWMNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDMQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPLNPVLVPPQGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTVDFRSYELKEGLLRAVAGTGMWECVDFFPVSEKYENGLDTSVNGAEVKHVMKVSLDDDRHDYYSIGTYDERNVLFTPDDAKNDVGVGLRYDYGIFYASKTIKRGEFCGVGLSIPRTMKLDRKTGSNLLQWPVAEVESLRLRSDEFQNLKAKPGSVVSVDIETATQLDIVAEFEIDKETLEKTPESNDEFTCGTSGGSKQRGALGPFGLLVLADEGLSEYTPQYFYVIKGSNGNLKTSFCSDQSRSSWANDVRKQIVGSSVPLLKGEKFSLRILVDHSIVESFAQGGRTVVTSRVYPTKAIYGAAKLFLFNNATEATVTASLKVWQMNSAFIRPFHPDQKN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0514 617 CDD GH32_Fruct1-like 121 377 - -
Aed6g0514 617 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 21 378 - -
Aed6g0514 617 SUPERFAMILY Concanavalin A-like lectins/glucanases 408 607 IPR013320 -
Aed6g0514 617 Gene3D - 420 603 - -
Aed6g0514 617 Gene3D Glycosyl hydrolase domain; family 43 119 419 IPR023296 -
Aed6g0514 617 Pfam Glycosyl hydrolases family 32 C terminal 411 602 IPR013189 -
Aed6g0514 617 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 378 - -
Aed6g0514 617 SUPERFAMILY Arabinanase/levansucrase/invertase 108 409 IPR023296 -
Aed6g0514 617 MobiDBLite consensus disorder prediction 1 21 - -
Aed6g0514 617 Pfam Glycosyl hydrolases family 32 N-terminal domain 115 379 IPR013148 -
Aed6g0514 617 Pfam Beta-fructofuranosidase, N-terminal domain 8 107 IPR021792 GO:0004564
Aed6g0514 617 SMART glyco_32 115 563 IPR001362 GO:0004553|GO:0005975
Aed6g0514 617 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 389 612 - -
Aed6g0514 617 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 389 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0514 Aed-Chr6 4416698 4421196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0514 9 611 Glycoside Hydrolase AT1G12240 59.242 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0514 K01193 - gmx:100788844 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0514 6 4416698 4421196 Aed6g0514 6 4416698 4421196 ECH
Aed11g1642 11 20337926 20339800 Aed6g0514 6 4416698 4421196 PCT