Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1642 ATGCGATTAATGTTGAATATTTGTGATACTAACGTTTTTCTTATCTTTGTGGGTGACTTCTGCTTGCTCTGTGGGGGAATCTGGTTTGCTCTGTTTCAGATCCTAATGTTGTCTATTAATTTGTCCCATTTCTTTTGCCTTGACTTGCCAAAATTCCCAACTTTATTATATTCGAGCATTGGTCCAATGTACTACAAAGGGTGGTATCACTTGTTCTACCAGTACAATCCTGAGGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCTGTATCAAGGGACATGATCCATTGGCTTCACCTTCCTCTAGCAATGCTCGCCGATCAATGGTATGACAAGAATGGTGTCTGGACTGGCTCTGCCACCATCTTACTCGATGGTCAAGTCATCATGCTTTATACTGGTTCCACCAACGACTCTGTGCAGGTTCAAAACCTTGCATACCCTGCTGACCCCTCCGATCCTCTCCTCGTTGATTGGATCAAATACCCTGCAAACCCTATTTTATTCCCACCACCTGGCATTGGTGCCAAAGATTTTCGTGACCCCACCACTGCTTGGCTCACCTCTCAAGGGAAGTGGCGCATAGCCATTGGCTCCAAGCTAAACAATACTGGCATTGCATTGGTTTATGATACCGATGACTTTAAGACCTATGAGCGTGTGGAGGGAGTGCTTCATGCTGTTCCTGGCACTGGCATGTGGGAATGTGTTGACTTCTTCCCAGTTTCCAGCAAGGGTGAAAATGGCTTGGATACCTCAATGAATGGGGAGAATGTGAAACATGTGGTCAAGGTTAGCTTGGATGATGATAGACATGATTACTATGTGTTGGGTACTTATGATGAGAAGAATGTTAAGTTCACACCTGATGATTTCAAAAATGATGTTGGTATTGGATTCAGATATGACTATGGTATATTTTATGCATCCAAGACTTTTTTTGATCAAAGTAAGGCCAGGAGATTGTTGTGGGGTTGGATTGGAGAGTCTGATAGCGAGTATGCCGATGTGGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAAACTGGTAGCAACTTACTTCACTGGCCTGTGGCAGAGGTAGAAAGTTTGAGATTGAGAAGTGATGAGTTCCAAAGTTTGAAGGTGAAACCAGGGTCAGTGGTCCCACTAGAAATTGGAACAGCTGCACAGTTAGGAGAACATCAAGTTGTACAGATAATTCAATGA 1236 0.4393 MRLMLNICDTNVFLIFVGDFCLLCGGIWFALFQILMLSINLSHFFCLDLPKFPTLLYSSIGPMYYKGWYHLFYQYNPEGAVWGDIVWGHAVSRDMIHWLHLPLAMLADQWYDKNGVWTGSATILLDGQVIMLYTGSTNDSVQVQNLAYPADPSDPLLVDWIKYPANPILFPPPGIGAKDFRDPTTAWLTSQGKWRIAIGSKLNNTGIALVYDTDDFKTYERVEGVLHAVPGTGMWECVDFFPVSSKGENGLDTSMNGENVKHVVKVSLDDDRHDYYVLGTYDEKNVKFTPDDFKNDVGIGFRYDYGIFYASKTFFDQSKARRLLWGWIGESDSEYADVAKGWASVQGIPRTVTLDKKTGSNLLHWPVAEVESLRLRSDEFQSLKVKPGSVVPLEIGTAAQLGEHQVVQIIQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1642 411 CDD GH32_Fruct1-like 61 354 - -
Aed11g1642 411 Pfam Glycosyl hydrolases family 32 N-terminal domain 61 366 IPR013148 -
Aed11g1642 411 Gene3D Glycosyl hydrolase domain; family 43 59 379 IPR023296 -
Aed11g1642 411 SUPERFAMILY Arabinanase/levansucrase/invertase 61 367 IPR023296 -
Aed11g1642 411 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 58 401 - -
Aed11g1642 411 SMART glyco_32 61 411 IPR001362 GO:0004553|GO:0005975
Aed11g1642 411 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 58 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1642 Aed-Chr11 20337926 20339800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1642 61 401 Glycoside Hydrolase AT1G12240 69.679 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1642 K01193 - gmx:100798772 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1642 11 20337926 20339800 Aed6g0514 6 4416698 4421196 PCT