Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0463 ATGGAGGACTCGTCCGGCCGCTTGAATATTCCTCCGGCCGCCGCCTCGGCGGCGACTCTCCGGCACGTGGACCGCTTGATCAACTCCAACCACTACACCTCGCCTTCCAGGACAATCTACTCCGACCGCTTCATTCCGAGCAGATCTGCCTCGAAATTCGCGCTCTTCGACATCGCCGCGCCGCCCGAGGGCCGCGACGACAGCTCCAGCGCCTACACCACGCTCCTCCGCACCGCGCTGTTCGGCCCCGACGTCACGCCGCCGCACACGCCGGCGAAAATGTCCTCGCCGGCGATGACGCTCCCCAGCCGGAACATTTTCCGGTACAAGACCGAGACGCGGCAGTCCATGCACTCTCTCTCGCCGTTCATGTGCGACGATTCGGTGCCCGGCGTTGTTCACGGCCCGGTCAAAGCTCCGAGGAAGGTTCCTAGGTCGCCTTTCAAGGTTCTGGATGCGCCTGCGCTGCAAGACGATTTTTACCTGAATCTCGTGGATTGGTCTTCGCATAATGTGTTAGCTGTTGGTCTGGGAAACTGTGTTTATCTCTGGAATGCTTGTAGCAGCAAGGTTACTAAGTTATGTGACTTGGGGATTGATGACCTCGTTTGTTCCGTTGGCTGGGCTCAGCGTGGTACACACCTTGCAGTTGGAACTAGCAATGGTAAAGTTCAGATTTGGGATGCATCTCGATGCAAGAAGATAAGATCTATGGAGGGTCATCGGTTACGTGTTGGGGCCTTGGCCTGGAGTTCATCTCTTTTGTCTTCTGGCGGTAGGGATAAGAATATCTATCAAAGAGATATCCGTGCACAAGAAGATTTTGTCAGTAAATTGTCAGGGCACAAATCAGAGGTTTGTGGACTGAAGTGGTCTTATGATAACCGTGAGTTGGCATCCGGAGGAAATGACAACCGATTGTTTGTTTGGAATCAACACTCAACTCAGCCTGTCCTGAAGTACTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATCTTCATGGACTTCTTGCATCTGGGGGAGGAACTGCAGACCGATGCATACGTTTCTGGAATACAACCACAAACTCACACTTAAGCTGCATGGACACTGGAAGTCAGGTTTGCAATCTTGTGTGGTCCAAAAATGTCAATGAACTAGTAAGCACGCATGGCTATTCTCAGAACCAGATAATTGTTTGGAGATACCCAACCATGTCAAAGTTGGCCACTCTTACGGGACACACCTACAGAGTTCTTTATCTTGCCATTTCTCCAGATGGACAGACTATTGTGACCGGAGCGGGAGATGAAACACTTAGGTTCTGGAATGTGTTCCCTTCCCCCAAATCACAGAATACTGACAGTGAAATCGGAGCATCATCTCTCGGAAGAACTATCATTAGGTGA 1401 0.5161 MEDSSGRLNIPPAAASAATLRHVDRLINSNHYTSPSRTIYSDRFIPSRSASKFALFDIAAPPEGRDDSSSAYTTLLRTALFGPDVTPPHTPAKMSSPAMTLPSRNIFRYKTETRQSMHSLSPFMCDDSVPGVVHGPVKAPRKVPRSPFKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDLVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKIRSMEGHRLRVGALAWSSSLLSSGGRDKNIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTIIR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0463 466 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 237 IPR001680 GO:0005515
Aed6g0463 466 PANTHER PROTEIN FIZZY-RELATED 1 21 466 - -
Aed6g0463 466 ProSiteProfiles Trp-Asp (WD) repeats profile. 409 442 IPR001680 GO:0005515
Aed6g0463 466 Pfam Anaphase-promoting complex subunit 4 WD40 domain 199 252 IPR024977 -
Aed6g0463 466 SUPERFAMILY WD40 repeat-like 156 442 IPR036322 GO:0005515
Aed6g0463 466 SMART WD40_4 272 311 IPR001680 GO:0005515
Aed6g0463 466 SMART WD40_4 231 268 IPR001680 GO:0005515
Aed6g0463 466 SMART WD40_4 314 356 IPR001680 GO:0005515
Aed6g0463 466 SMART WD40_4 144 185 IPR001680 GO:0005515
Aed6g0463 466 SMART WD40_4 402 441 IPR001680 GO:0005515
Aed6g0463 466 SMART WD40_4 188 228 IPR001680 GO:0005515
Aed6g0463 466 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 409 442 - -
Aed6g0463 466 ProSiteProfiles Trp-Asp (WD) repeats profile. 279 320 IPR001680 GO:0005515
Aed6g0463 466 Pfam WD domain, G-beta repeat 276 311 IPR001680 GO:0005515
Aed6g0463 466 Pfam WD domain, G-beta repeat 316 356 IPR001680 GO:0005515
Aed6g0463 466 Pfam WD domain, G-beta repeat 405 441 IPR001680 GO:0005515
Aed6g0463 466 Gene3D - 137 446 IPR015943 GO:0005515
Aed6g0463 466 ProSitePatterns Trp-Asp (WD) repeats signature. 428 442 IPR019775 -
Aed6g0463 466 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 21 466 IPR033010 GO:0010997|GO:0097027|GO:1904668
Aed6g0463 466 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 279 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0463 Aed-Chr6 4037853 4043887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0463 215 444 Miscellaneous Gene Families AT5G08390 21.459 5.41e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0463 K03364 - gmx:100780928 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0463 6 4037853 4043887 Aed6g0463 6 4037853 4043887 ECH
Aed6g0463 6 4037853 4043887 Aed11g1679 11 20519756 20523708 PCT