Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2371 ATGTCAATTGCTTTGAGTTCAGTTTTCAACGACAAGTTACATTGGGAAGGGTTACCAGAACATTGTTCTGGCGAACCAATCTTGATTTACCTCACTGTGGATGGTTCCGTGACCCCAATGCGCGTGTTGGAGTCCGATTCCATTGCTTCGGTGAAACTGAGGATTCAGCAATGCAAAGGCTTCGTCGTGAAGAAGCAGAAGCTGGTTTTTGGTGGCAGAGAGCTGGCTCGCAATAATACACTCATCAAGGATTATGGCGTCAACGATGGCAATGTTCTTCACTTGGTTCTTCGTCTCTCTGATCTTCTCTTCATTGTTGTGAGGACCGTTTCTGGGAAGGAGTTTGAGTTCAACATCGACAGACACCGAAATGTGGGGTATTTGAAGCAAAGCATTCTAAAGAAAGGGGAAGGTTTGATTGATCAAGAGCTTTTCTGCAACGATGAGAAGCTTGATGATGATCAGAGACTCTTCCATGACATATGCAAGAGTGATGATGATGTCATTCATTTGATAATTAAGAAATCGGCTAAGGTCATTCACAAGGATTTGAAGCTCTCGGTGGAGGCACCATCTGAGAGAGCAGCAAAACATTTTCAGATAGCAAAGGTGCCACCTGATGTAGGTTTCTGGTTGGAGCCGATTATTGTGAATCCCAAGATCAATTATTTTCCTTTCCTTTGGGACATGATAAACTCCACATTTGAAGGTTTGAAGAAGGGAAATGACCCAATTAGGTCCTCTGAGGGCACTGGAGGGACATACTTGATGCAAGATTCAACAGGTGAGGAACATGTTTCGGTTTTCAAGCCGATGGATGAGGAACCAATGGCTGTGAACAACCCAAAAGGTCTTCCAAATTCATCAAATGGTGAGGGTTTGAAAAGAGGGACAAAGGTTGGAGAAGGAGCCTTGAGGGAAGTTGCAGCTTATTTATTGGATCATCCAAAGACTGGACCGCGTTTGGTGAATGGTGATTGTGAAGCAGTGGGGTTCTCTGGTGTTCCCCCAACTGTTATGGTGCAGTGTTTGCACCAACAATTTAACCACCCAAATGGCTTTGCTTGCTCCTCAAAACATGTTAAGATTGGGTCACTGCAGAAGTTTATGAGTAATAATGGTAATTGTGAGGACTATGGACCCTGGGCTTTCCCAGTGGAGGAGGTGCATAAGATTACTGTGCTTGATATCAGATTGGCTAATGCTGACAGGCATGCTGGGAATATCTTGATCAGAAAGGACCCAGACGGCAAGATAAAACTGGTTCCTATTGACCATGGCTATTGTCTACCAGATAGATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCACAAGCACGTCAGCCTTACTCTCCTGAGACTGTCGATTATATAAAATCTCTGGATGCTGAAAAAGACTTGGAACTTTTGAAATGTTGTGGATGGGATATCCCAGTTGAGTGTGCTAGAACACTTTGCATTTCAACAATGTTGCTGAAGAAAGGGGTTCAAAGAGGCCTCACTCCCTATGACATTGGAAGCATCATGTGTAGGGAAAATTTGAACAAGGAATCTGTGATTGAAGAAATTATTGGGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGATGAGGAATCTGCATTTCTTGAAGCCATCTCTCAAATCATGGATCACCGCCTTGATTCTTGA 1674 0.4379 MSIALSSVFNDKLHWEGLPEHCSGEPILIYLTVDGSVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARNNTLIKDYGVNDGNVLHLVLRLSDLLFIVVRTVSGKEFEFNIDRHRNVGYLKQSILKKGEGLIDQELFCNDEKLDDDQRLFHDICKSDDDVIHLIIKKSAKVIHKDLKLSVEAPSERAAKHFQIAKVPPDVGFWLEPIIVNPKINYFPFLWDMINSTFEGLKKGNDPIRSSEGTGGTYLMQDSTGEEHVSVFKPMDEEPMAVNNPKGLPNSSNGEGLKRGTKVGEGALREVAAYLLDHPKTGPRLVNGDCEAVGFSGVPPTVMVQCLHQQFNHPNGFACSSKHVKIGSLQKFMSNNGNCEDYGPWAFPVEEVHKITVLDIRLANADRHAGNILIRKDPDGKIKLVPIDHGYCLPDRFEDCTFDWLYWPQARQPYSPETVDYIKSLDAEKDLELLKCCGWDIPVECARTLCISTMLLKKGVQRGLTPYDIGSIMCRENLNKESVIEEIIGEAQDSLLPGMEDEESAFLEAISQIMDHRLDS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2371 557 SMART ubq_7 27 98 IPR000626 GO:0005515
Aed5g2371 557 SMART ubq_7 103 174 IPR000626 GO:0005515
Aed5g2371 557 SUPERFAMILY Ubiquitin-like 102 179 IPR029071 -
Aed5g2371 557 SUPERFAMILY Protein kinase-like (PK-like) 397 547 IPR011009 -
Aed5g2371 557 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 2 556 - -
Aed5g2371 557 Pfam Ubiquitin family 32 99 IPR000626 GO:0005515
Aed5g2371 557 CDD Ubl_ubiquitin_like 105 172 - -
Aed5g2371 557 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
Aed5g2371 557 Pfam Phosphatidylinositol 3- and 4-kinase 250 505 IPR000403 -
Aed5g2371 557 SUPERFAMILY Ubiquitin-like 31 100 IPR029071 -
Aed5g2371 557 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 241 540 IPR000403 -
Aed5g2371 557 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 556 IPR044571 -
Aed5g2371 557 Gene3D - 22 101 - -
Aed5g2371 557 MobiDBLite consensus disorder prediction 275 295 - -
Aed5g2371 557 ProSiteProfiles Ubiquitin domain profile. 103 178 IPR000626 GO:0005515
Aed5g2371 557 Gene3D - 104 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2371 Aed-Chr5 25213682 25216511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2371 2 556 Acyl Lipid Metabolism Gene Families AT5G24240 57.867 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2371 - - gmx:100809172 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1790 11 21250563 21253588 Aed5g2371 5 25213682 25216511 PCT