Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2360 ATGGCAGAAAAGAGGTTAATCGTAGAGGTTGAGAAAGCCACAGAGGCGAGAGAAGGAAGGCCCTCCATGGGTCCCGTCTACCGCAGTGTTTTCTCCGACGATCCACATCCTCCTCCCATTCAAGGCCTTGATTCCTGCTGGGATATTTTCAGCATGGCTGTTGAAAAATATCCAACAAAGCAAATGCTTGGTGTACGTGAAATCGTGAATGGGAATCCTGGCAAGTACAAGTGGCAAACTTACCAAGAAGTGTACGACTTGGTGATCATTGTTGGAAACTCCATCCGTGCTTCTGGTTACGGGGAGGGTGTAAAATGTGGTATTTATGGTGCCAATTGCCCAGAATGGATAGTGAGCATGGAGTTATTAAAGACATTTCCAAATGCAGCAAAATTTCTCAAGACACTTGTGAGCTTTGGAAAGGTTTCCCCTGAACAAAAGCATGACGTTGAAAACTTTGGATTGACAATCTATGCATGGGACGAATTTTTGGAAGTGGGTCAAAATCAGACTTTTGATCTTCCTGTGAAAAAGAAAAGTGATGTGTGTACAATAATGTATACAAGTGGAACTACTGGTGACCCCAAGGGAGTGTTGATATCCAATGAGAGCATTATTACACTCTTAGCTGGGATTCAACTACTGCTGAAGAATTGCAATGAAAAATTGAGTGAAAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGATAGGGCCATTGAGGAGGCAATGATAATGCATGGCGCCTCAATAGGTTTTTGGCGTGGAGATGTCAGAGTGTTACTGGAAGACATTGCGGAGCTAAGGCCAACCATTTTCGTTGCCGTTCCCCGTGTGCTTGACAGAGTGTACAATGGTTTGACACAAAAGATTTCTTCGGGGAGCTTTATGAAACAGACAATGTTCAATTTCGCCTACTCATACAAGTCGCATAACATGACTAAAGGGCAAACTCATGATGAGGCATCTCCATTATTTGACAGAATTGTATTTAGTAAGGTGAAGCAAGGTTTAGGGGGTCGTGTACGTATTATTTTGTCCGGAGCAGCACCTCTATCTAGACATGTGGAAAGTTTCCTACGGGTAGTGACTTGTGCTCATATCCTACAAGGATATGGTCTGACTGAAACCTGTGCTGGAACCTTTGTGTCATTACCAAACGAAAAGGACATGCTTGGTACGGTGGGGCCTCCTGTACCATATGTGGATGTGTGCTTGGAATCTATTCCTGAAATGGGATATGATGCACTTGCAAGCACTCCAAAAGGAGAAATCTGTGTCAGAGGAAGTACTGTGTTTGCAGGCTACCACAAACGTGAAGACCTCACCAAAGAGGTTATGATTGATGGATGGTTCCACACAGGGGATATTGGAGAGTGGCTACCTAATGGGACCTTGAAGATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTTCAAGCTTCTCCTGTTGAATCTATATGGGTCTATGGAAACAGCTTTGAGTCATACCTGGTTGCTATTGTTAACCCCAGCAAGCGAGCACTTGATAAGTGGACAGAAGAAAATGATATAACCATGGAATTTAATTCTCTCTGTGAAGATTCTAGGACAAAAACTTACATAGTTGGAGAGCTCGCCAAGATTGCAAAGGATAAGAAGTTGAAAGGTTTTGAGTTTATTAAAGCTGTTCATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCAACATTTAAGAAGAAGAGACCCGAATTGCTTAAATACTACCAGAATGCCATTGACAACATGTACAGCACACTGAACACACAGAACAAACCTAGTGCCTGA 1872 0.4236 MAEKRLIVEVEKATEAREGRPSMGPVYRSVFSDDPHPPPIQGLDSCWDIFSMAVEKYPTKQMLGVREIVNGNPGKYKWQTYQEVYDLVIIVGNSIRASGYGEGVKCGIYGANCPEWIVSMELLKTFPNAAKFLKTLVSFGKVSPEQKHDVENFGLTIYAWDEFLEVGQNQTFDLPVKKKSDVCTIMYTSGTTGDPKGVLISNESIITLLAGIQLLLKNCNEKLSEKDVYLSYLPLAHIFDRAIEEAMIMHGASIGFWRGDVRVLLEDIAELRPTIFVAVPRVLDRVYNGLTQKISSGSFMKQTMFNFAYSYKSHNMTKGQTHDEASPLFDRIVFSKVKQGLGGRVRIILSGAAPLSRHVESFLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVCLESIPEMGYDALASTPKGEICVRGSTVFAGYHKREDLTKEVMIDGWFHTGDIGEWLPNGTLKIIDRKKNIFKLSQGEYVAVENLENIYVQASPVESIWVYGNSFESYLVAIVNPSKRALDKWTEENDITMEFNSLCEDSRTKTYIVGELAKIAKDKKLKGFEFIKAVHLDPVPFDMERGLMTPTFKKKRPELLKYYQNAIDNMYSTLNTQNKPSA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2360 623 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Aed5g2360 623 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 6 121 - -
Aed5g2360 623 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 120 614 - -
Aed5g2360 623 Gene3D - 43 121 IPR042099 -
Aed5g2360 623 Gene3D - 125 474 IPR042099 -
Aed5g2360 623 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 121 - -
Aed5g2360 623 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 120 614 - -
Aed5g2360 623 SUPERFAMILY Acetyl-CoA synthetase-like 42 615 - -
Aed5g2360 623 CDD LC-FACS_euk 74 613 IPR045311 GO:0004467|GO:0006631
Aed5g2360 623 Pfam AMP-binding enzyme 173 482 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2360 Aed-Chr5 25161696 25166375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2360 3 618 Acyl Lipid Metabolism Gene Families AT4G23850 64.590 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2360 K01897 - gmx:100811306 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1780 11 21184801 21194611 Aed5g2360 5 25161696 25166375 PCT