Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2279 ATGGCTGTCGTTTCGCGAGCTGCGACGACCTATACGGGCCACGACTTAATACGAAACGAGTTCAATAGGAAAACCTGCGTTGGCAACACCAATTTGTGTTGCTCTAAGAAAGCATCAGCACCGCAGAGGATGATTGTTGGGAGTACACGTGGCAGTAGAGTGATTGTTGCTGCGAGTCCTCCCACCGAAGACGCTGTAGTTGCCACTGGCCCACTCACTAAGCAGGATCTCGTCGATTATCTTGCCTCGGGTTGTAAGCCCAGGGATAAATGGAGAATAGGTACTGAACATGAGAAGTTTGGTTTTGAGTTTGGAAGCTTGCGTCCTATGAAGTATGAACAAATAGCAGAATTGCTGAATGGCATCGCTGAGAGATTTGACTGGGATAAAATAATGGAAGGTGATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCATTAGAGCCTGGTGGTCAGTTTGAACTCAGTGGAGCTCCTCTTGAAACCTTGCATCAAACTTGTGCTGAAGTTAATTCTCACCTTTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGGGAATCAAAGACATACCTATAATGCCAAAGGGAAGATACGAAATTATGAGGAATTACATGCCTAAAGTTGGCTCTCTTGGGCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCTGAAGCTGACATGATCAGGAAATTCCGTGCAGGCCTTGCTTTGCAGCCTATAGCAACGGCCCTTTTTGCAAATTCACCCTTTAAAGAGGGAAAGCCAAATGGTTTTGTCAGTATGAGAAGCCATATTTGGACTGATACTGATAAGGACCGCACCGGCATGCTGCCTTTTGTTTTTGATGACTCTTTTGGGTTTGAGCAATACGTTGATTATGCTCTTGATGTTCCTATGTATTTTGTCTATCGGAAACACAGATATATCGACTGTACTGGAAAGACCTTCAGGGACTTCTTGGCTGGAAGACTTCCTTGTATTCCTGGTGAATTACCAACTCTCAATGACTGGGAAAATCACTTGACAACTATATTTCCAGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGGTTATTGTACGATGATGTCTCTCTACAAAGTGTTTTGGATATGACAGCTGATTGGACTCCAGAAGAAAGACAAATGTTAAGGAATAAGGTTCCTGTAACTGGTCTGAAGACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTACAGTTGGCAAAGGTAAAAGGTGTCATTATTTTTGTTATTGCTGTTATTTTCAATGTTGCTGAGGGCATTGGGGTGCATCTACAGGATGGCTTGGAGAGAAGAGGCTTCAAGGAATCGGGATTTTTGAATGAGGTTGCTGAGGTGGTTAGAACAGGTGTCACTCCAGCCGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCCGTAGATCATGTGTTTGAGGAATTGCTTTATTGA 1590 0.439 MAVVSRAATTYTGHDLIRNEFNRKTCVGNTNLCCSKKASAPQRMIVGSTRGSRVIVAASPPTEDAVVATGPLTKQDLVDYLASGCKPRDKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGIAERFDWDKIMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFKEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKHRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDDVSLQSVLDMTADWTPEERQMLRNKVPVTGLKTPFRDGLLKHVAEDVLQLAKVKGVIIFVIAVIFNVAEGIGVHLQDGLERRGFKESGFLNEVAEVVRTGVTPAERLLELYHGKWEQSVDHVFEELLY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2279 529 PANTHER GLUTAMATE--CYSTEINE LIGASE 464 529 - -
Aed5g2279 529 PANTHER GLUTAMATE--CYSTEINE LIGASE 47 453 - -
Aed5g2279 529 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 71 529 IPR011556 GO:0004357|GO:0006750
Aed5g2279 529 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 464 529 IPR035434 GO:0004357|GO:0006750
Aed5g2279 529 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 47 453 IPR035434 GO:0004357|GO:0006750
Aed5g2279 529 Gene3D - 57 529 - -
Aed5g2279 529 Pfam Glutamate-cysteine ligase family 2(GCS2) 123 415 IPR006336 GO:0004357|GO:0042398
Aed5g2279 529 SUPERFAMILY Glutamine synthetase/guanido kinase 83 527 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2279 Aed-Chr5 24574026 24581626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2279 K01919 - gmx:547545 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1717 11 20802599 20806072 Aed5g2279 5 24574026 24581626 PCT