Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1717 ATGGGATCCCTTGATCTGAAATGGAGTTCAGGATGCATGGTGGTAGAGTCAACTAAAGCTAAAGCTAAAGGGGAAGATAACCGTTTTAACTCTTCCCATCTGTACAAAAGAAGAATTTTAAGAGACAGACGAGGGCAAGGGCAAAGATCAGTAATAGTTGCTACTGGGCCAGCCATAGATCATGCTCCTGTTAATGTTATTGCCAACCCCTTGACTAAAGATGATCTCATTGACTACTTCGTATCTGGTTGCAAGCCCAAACATAACTGGAGGTCGCTGGTCATTTACCTACTTTGCATATGGCCGGTCGGTCTTTGCAGAATAGGTACAGAGCACGAGAAGTTTGGTTTTGAGTTTAAAACTTTACGTCCCATTAATTACAAACAAATATCAGCTTTACTCAATCGCATTGCTGCAAGATTTGATTGGGACAAAATCATGGAAGCTGACAACATCATAGGACTCAATAATGGCAAGCAAAGCATATCATTAGAACCTGGTGGTCAATTTGAGCTTAGTGGTATGCCTTTGAAAACATTGCATCAAACTTGCGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTAGCAGAGGAAATGGGAATTGGATTTTTGGGATTAGGTTTTCAGCCTAAATGGAGACTGGAAGACATTCCTGGAGTGCCTAAGGTACGGTATAACATTATGCAAAATCACTTACAAAAATTTGGCTCAGCAGCCATTGAATCATTGTTCATGACATGCTCGGTTCAGGTTAACCTGGACTTCAGCTCTGAAGCAGACATGATAAAGAAAATGCGCGCTAGTCTTGCTTTGCAGCCTTTAGCAGCAGCCTTATTTGCTAATTCACCTTTCAAGGAAGGGATTCCAAATGCTTACCTCAGCATAAGAAGCCTTAAGGTGGGTCAGGTCGACAAACGTCGCACTGGCATACTCCCCTTTGCTTTTTATGACACTTTTGGGTTTGAGCAGTATGTTGATTACGCTCTTGATGTACCAATGTTGTTTGTTTATCGAAAAAACAAGTACATTGACTGTGACGGCATGTCATTCCGGGACTTCATGGCAGGTAAACTCCCTGCCACTCCAGGTCAGGTGCCAACACTTGGTGACTGGGAAAATCATCTAACAACCATATTTCCCGAGGTGAGGCTAAAGAGATACATGGAAATGAGGGGTGCTGATTGTGGCCCCTTGGACATGTTATGCGCTCTGCCGGCTTTTTGGGTAGGTTTACTGTACGATGAGGCTTCACTACAAAATGTTCTAGATATGATTGCTGATTGGACCCCTGAAGACATACAGAATTTAAGGAATATGGTTCCCATAACTGGTTTAAGGACTCCATTTCAAGGTAGATTTCTGCAACATATTGCAGAAGACGTGCTTAAGTGGTCAAAGGATGGCTTGGACAGAAGATGCTTAAATGAATCTATTTTCTTGGATCCAATGAAGGAAGTAGTTGGAACAGGTTTAACCCGAGCAGACAAGCTATTGGAGATGTATAATAACAAGTGGGGAAACAACATAGATCCTGTGTTCAGAGAGCGCTGCTACTAA 1563 0.4223 MGSLDLKWSSGCMVVESTKAKAKGEDNRFNSSHLYKRRILRDRRGQGQRSVIVATGPAIDHAPVNVIANPLTKDDLIDYFVSGCKPKHNWRSLVIYLLCIWPVGLCRIGTEHEKFGFEFKTLRPINYKQISALLNRIAARFDWDKIMEADNIIGLNNGKQSISLEPGGQFELSGMPLKTLHQTCDEINSHLYQAKTVAEEMGIGFLGLGFQPKWRLEDIPGVPKVRYNIMQNHLQKFGSAAIESLFMTCSVQVNLDFSSEADMIKKMRASLALQPLAAALFANSPFKEGIPNAYLSIRSLKVGQVDKRRTGILPFAFYDTFGFEQYVDYALDVPMLFVYRKNKYIDCDGMSFRDFMAGKLPATPGQVPTLGDWENHLTTIFPEVRLKRYMEMRGADCGPLDMLCALPAFWVGLLYDEASLQNVLDMIADWTPEDIQNLRNMVPITGLRTPFQGRFLQHIAEDVLKWSKDGLDRRCLNESIFLDPMKEVVGTGLTRADKLLEMYNNKWGNNIDPVFRERCY 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1717 520 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 70 520 IPR011556 GO:0004357|GO:0006750
Aed11g1717 520 PIRSF GCL 58 520 IPR035434 GO:0004357|GO:0006750
Aed11g1717 520 Pfam Glutamate-cysteine ligase family 2(GCS2) 140 430 IPR006336 GO:0004357|GO:0042398
Aed11g1717 520 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 81 520 - -
Aed11g1717 520 Gene3D - 57 520 - -
Aed11g1717 520 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 81 520 IPR035434 GO:0004357|GO:0006750
Aed11g1717 520 SUPERFAMILY Glutamine synthetase/guanido kinase 102 507 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1717 Aed-Chr11 20802599 20806072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1717 K01919 - gmx:100775188 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1717 11 20802599 20806072 Aed11g1717 11 20802599 20806072 ECH
Aed11g1717 11 20802599 20806072 Aed5g2279 5 24574026 24581626 PCT