Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2232 ATGACCATGCATCGCGAGTCTTGGGCGTTTGTGTTCGGCCTTTTGGGCAACATCATCTCCTTTGGAGTATTCCTTGCTCCATTGCCAACCTTTTACCTAATCTACAAGAAGAAATCAACTGAAGGGTACCAGTCACTTCCTTATGTTGTTGCACTCTTCAGTGCAATGCTTTGGATTTACTATGCTTTCGTCAAAAGGGAAGCTGCCCTCCTCCTCATTACCATTAACACGTTTGGAATTGTTGTGGAGTCAATTTACCTTACAATCTTCCTGATTTATGCCCCAAAGAAACCTAGGCTTACAACCATCAAGCTTCTTCTCCTGCTGAATGTGTTTGGGTTTGGAGCCATGCTTCTATCAACTCTCTACCTGTCAAAGGGACGACAGCGTCTTGATATCATAGGATGGATTTGCCTTGTTTTCAACATCAGTGTCTTTGCTGCTCCTCTCTGCATTATTAAACGAGTCATAAAGACAAGGAGCGTGGAATACATGCCCTTTACTTTGTCCATGTTTTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTATTACGTTGCTCTCCCAAATACACTCGGGTTTCTGTTCGGCATAATTCAGATGGTGATGTATTTGATGTATAGAAACGCCACTCCAGTGGCATTAGAGGAGCCAGTGAAGGGTGGTCAAGAATTGAATGGTGGCCACATCATTGACGTTGTGAAGATGGGAACAATGGAACAGAATCATGGTGGTGGCGTTGGCAAAGTCTGA 771 0.4384 MTMHRESWAFVFGLLGNIISFGVFLAPLPTFYLIYKKKSTEGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLTIFLIYAPKKPRLTTIKLLLLLNVFGFGAMLLSTLYLSKGRQRLDIIGWICLVFNISVFAAPLCIIKRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLMYRNATPVALEEPVKGGQELNGGHIIDVVKMGTMEQNHGGGVGKV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2232 256 PANTHER RAG1-ACTIVATING PROTEIN 1 4 248 - -
Aed5g2232 256 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 248 - -
Aed5g2232 256 Gene3D - 129 220 - -
Aed5g2232 256 Gene3D - 11 97 - -
Aed5g2232 256 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Aed5g2232 256 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2232 Aed-Chr5 24317601 24320126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2232 1 249 Miscellaneous Gene Families AT5G50790 53.012 1.77e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2232 K15382 - gmx:100805676 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2232 5 24317601 24320126 Aed5g2232 5 24317601 24320126 ECH
Aed5g2232 5 24317601 24320126 Aed10g0782 10 6485935 6488554 PCT